BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036163
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   114   6e-24
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi...   112   2e-23
dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]                      112   2e-23
ref|NP_175945.1| RuBisCO large subunit-binding protein subunit b...   112   2e-23

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +3

Query: 24  QEVLSCDDVNYGYNAAKDCYEDLMAAGIMDPSKVVRCCVEHAASVAKTFLMSDLVVVDVK 203
           ++VLS DD  YGYNAA DCYEDLMAAGIMDPSKVVRCC+EHAASVAKTFL SD VVVD+K
Sbjct: 495 EKVLSNDDFRYGYNAAIDCYEDLMAAGIMDPSKVVRCCLEHAASVAKTFLTSDAVVVDIK 554

Query: 204 DSEPTPMRKPM 236
           + +  P RKPM
Sbjct: 555 ELDLIPRRKPM 565


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +3

Query: 24  QEVLSCDDVNYGYNAAKDCYEDLMAAGIMDPSKVVRCCVEHAASVAKTFLMSDLVVVDVK 203
           ++VLS DD  YGYNAA DCYEDLMAAGIMDPSKVVRCC+EHAASVAKTFL SD VVVD+K
Sbjct: 469 EKVLSNDDFRYGYNAAIDCYEDLMAAGIMDPSKVVRCCLEHAASVAKTFLTSDAVVVDIK 528

Query: 204 DSEPTPMRKPM 236
           + +  P RKPM
Sbjct: 529 ELDLIPRRKPM 539


>ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata]
           gi|297340348|gb|EFH70765.1| CPN60B [Arabidopsis lyrata
           subsp. lyrata]
          Length = 600

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/77 (68%), Positives = 65/77 (84%)
 Frame = +3

Query: 24  QEVLSCDDVNYGYNAAKDCYEDLMAAGIMDPSKVVRCCVEHAASVAKTFLMSDLVVVDVK 203
           ++VLS D+V +GYNAA   YEDLMAAGI+DP+KVVRCC+EHAASVAKTFLMSD VVV++K
Sbjct: 523 EKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIK 582

Query: 204 DSEPTPMRKPMQSSGVG 254
           + EP P+  PM +SG G
Sbjct: 583 EPEPVPVGNPMDNSGYG 599


>dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]
          Length = 234

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/77 (68%), Positives = 65/77 (84%)
 Frame = +3

Query: 24  QEVLSCDDVNYGYNAAKDCYEDLMAAGIMDPSKVVRCCVEHAASVAKTFLMSDLVVVDVK 203
           ++VLS D+V +GYNAA   YEDLMAAGI+DP+KVVRCC+EHAASVAKTFLMSD VVV++K
Sbjct: 157 EKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIK 216

Query: 204 DSEPTPMRKPMQSSGVG 254
           + EP P+  PM +SG G
Sbjct: 217 EPEPVPVGNPMDNSGYG 233


>ref|NP_175945.1| RuBisCO large subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|30695947|ref|NP_849811.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
           Full=Chaperonin 60 subunit beta 1, chloroplastic;
           Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
           subunit beta 1; AltName: Full=RuBisCO large
           subunit-binding protein subunit beta, chloroplastic;
           Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
           Rubisco subunit binding-protein beta subunit
           [Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
           subunit binding-protein beta subunit [Arabidopsis
           thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
           binding-protein beta subunit [Arabidopsis thaliana]
           gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
           thaliana] gi|332195130|gb|AEE33251.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana] gi|332195131|gb|AEE33252.1| RuBisCO large
           subunit-binding protein subunit beta [Arabidopsis
           thaliana]
          Length = 600

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/77 (68%), Positives = 65/77 (84%)
 Frame = +3

Query: 24  QEVLSCDDVNYGYNAAKDCYEDLMAAGIMDPSKVVRCCVEHAASVAKTFLMSDLVVVDVK 203
           ++VLS D+V +GYNAA   YEDLMAAGI+DP+KVVRCC+EHAASVAKTFLMSD VVV++K
Sbjct: 523 EKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIK 582

Query: 204 DSEPTPMRKPMQSSGVG 254
           + EP P+  PM +SG G
Sbjct: 583 EPEPVPVGNPMDNSGYG 599