BLASTX nr result

ID: Coptis23_contig00036160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036160
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536322.1| PREDICTED: uncharacterized protein LOC100801...    81   1e-13
ref|XP_002270566.1| PREDICTED: uncharacterized protein LOC100252...    81   1e-13
ref|XP_002520703.1| gtpase activating protein, putative [Ricinus...    81   1e-13
ref|XP_004148879.1| PREDICTED: uncharacterized protein LOC101220...    77   1e-12
ref|XP_003521525.1| PREDICTED: uncharacterized protein LOC100812...    76   3e-12

>ref|XP_003536322.1| PREDICTED: uncharacterized protein LOC100801481 [Glycine max]
          Length = 458

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
 Frame = -3

Query: 371 SGELRGPNSDYEDHASYSLSSEDEGEVDVLNEI-EECFLRQLDEKEEISVDIESCIQESA 195
           SGELRG  SDY+DHA Y  SS  EGE   L+EI EECFL+QLDE +      +   +ESA
Sbjct: 328 SGELRGTKSDYDDHAHYGHSS--EGEAGSLSEIEEECFLKQLDENK------KGFSEESA 379

Query: 194 SDLRIEHMSSPNSFSGYNADSALSFSDTRNGSSCLST------SNADESVTS 57
             + ++   S  SFSGYN + ++S +D + G+SCLST      SN D S +S
Sbjct: 380 --VYLDKYVSTRSFSGYNMEPSISVTDGKAGNSCLSTTLTDLASNVDSSSSS 429


>ref|XP_002270566.1| PREDICTED: uncharacterized protein LOC100252743 [Vitis vinifera]
          Length = 479

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
 Frame = -3

Query: 371 SGELRGPNSDYED-HASYSLSSE----DEGEVDVLNEIEECFLRQLDEKEEISVDIESCI 207
           S ELR P SDY+D HA YS SSE    D+ EV   + ++ECFLRQLDE E+++   E   
Sbjct: 328 SCELRRPTSDYDDDHAHYSHSSEHEDEDDDEVQSPSMMQECFLRQLDENEKVT---EIFP 384

Query: 206 QESASDLRIEHMSSPNSFSGYNADSALSFSDTRNGSSCLSTSNADESVTSTMAAKTDMAN 27
           +E+A D + EH    N     N +S  SF+D++NGSS LSTS+ +E    +       AN
Sbjct: 385 EETARDSQGEHGIPTNCV--LNVESGASFTDSKNGSSGLSTSDGEEDSGESSIVVEQKAN 442

Query: 26  ADIPSE 9
            + PS+
Sbjct: 443 KNSPSK 448


>ref|XP_002520703.1| gtpase activating protein, putative [Ricinus communis]
           gi|223540088|gb|EEF41665.1| gtpase activating protein,
           putative [Ricinus communis]
          Length = 446

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = -3

Query: 371 SGELRGPNSDYEDHASYSLSSEDE--GEVDVLNEIEECFLRQLDEKEEISVDIESCIQES 198
           SGELR   SDY+DHA Y   S+D+   EV+ L+EIEECFLRQLDEK+      +   ++ 
Sbjct: 303 SGELRQEPSDYDDHAHYGAGSDDDIGDEVESLSEIEECFLRQLDEKKSAP---DIFFEQP 359

Query: 197 ASDLRIEHMSSPNSFSGYNADSALSFSDTRNGSSCLSTSNADESVTS 57
             DL  E   SP + SG+  + A+SF+D++N +S  +TS+ ++S  S
Sbjct: 360 PGDLPRE-FPSPKTCSGFKMEYAISFTDSKNENSSPATSDGEDSRAS 405


>ref|XP_004148879.1| PREDICTED: uncharacterized protein LOC101220148 [Cucumis sativus]
           gi|449491523|ref|XP_004158925.1| PREDICTED:
           uncharacterized protein LOC101230412 [Cucumis sativus]
          Length = 481

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
 Frame = -3

Query: 365 ELRGPNSDYE-DHASYSLSSEDEGEVD-VLNEIEECFLRQLDEKEEISVDIESCIQESAS 192
           E RGPNSD E D   Y+ SSED  E +  L+EIE+CFLRQL+E +      ESC   +  
Sbjct: 334 ESRGPNSDVENDVDDYNHSSEDGDEEEGSLSEIEDCFLRQLNETKS-----ESCRSSTRQ 388

Query: 191 DLRIEHMSSPNSFSGYNADSALSFSDTRNGSSCLSTSNAD 72
           +  ++   SP S SG+N +S+++F+D++N +SCLS++++D
Sbjct: 389 EGDLDMELSPRSCSGFNVESSITFTDSKNENSCLSSTSSD 428


>ref|XP_003521525.1| PREDICTED: uncharacterized protein LOC100812700 [Glycine max]
          Length = 467

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
 Frame = -3

Query: 371 SGELRGPNSDYEDH---ASYSLSSEDEGEVDV-LNEIEECFLRQLDEKEEISVDIESCIQ 204
           SGELR   SD +DH    +YS +SE+EGE D  +++I ECFL++LDEK +         +
Sbjct: 325 SGELRETKSD-DDHDHDVNYSHASEEEGEADASVSDIVECFLKRLDEKTK------RFSE 377

Query: 203 ESASDLRIEHMSSPNSFSGYNADSALSFSDTRNGSSCLSTSNADESVTSTMAAKTDMANA 24
           E A  L+ E + SP S SGYN +SAL+F+D +   SC S S  ++S T T+ A+   A+ 
Sbjct: 378 EPAGYLQ-EKLESPKSCSGYNLESALTFTDIKTVDSCSSPSYENDSRT-TLTAEESNADT 435

Query: 23  DIPS 12
             PS
Sbjct: 436 SSPS 439


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