BLASTX nr result

ID: Coptis23_contig00036144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036144
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002539968.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002539784.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_003551789.1| PREDICTED: uncharacterized protein LOC100781...    64   1e-08
ref|XP_002530814.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|222848272|gb|EEE85819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +2

Query: 95  PSSHSTNDKYHLW----NTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTNSES--EDI 256
           P+S+ST    H      N+PIPYLF  LA M            C++RKSS+NS S  E  
Sbjct: 3   PASNSTTPAVHAGYQDRNSPIPYLFASLALMLALIALSLIILACSYRKSSSNSSSDPEAR 62

Query: 257 EKAPNLSLPPAEMEPKIVVIMAGDHMPTF 343
           EK+       AEMEPKIVVIMAGD  PT+
Sbjct: 63  EKSGKQGEMRAEMEPKIVVIMAGDDNPTY 91


>ref|XP_002539968.1| conserved hypothetical protein [Ricinus communis]
           gi|223500659|gb|EEF22415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
 Frame = +2

Query: 98  SSHSTNDKYHLWNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKS--STNSESEDIEKAPN 271
           S+ S N  +  WN+P+PYLFGGLA M            C+++ S  S NS   D + A  
Sbjct: 11  SAPSVNGGFQHWNSPVPYLFGGLALMLGLIAMALMILACSYKNSSPSNNSSPRDHQAAEE 70

Query: 272 LSLP-------PAEMEPKIVVIMAGDHMPTF 343
            S           EMEPKIVVIMAGDH PT+
Sbjct: 71  KSRHDHKRAELQMEMEPKIVVIMAGDHNPTY 101


>ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis]
           gi|223502421|gb|EEF22599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +2

Query: 131 WNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTNSESEDIEKAPNLSLPPAEM----- 295
           W++PIPYLFGGLA M            C++RKS  N ES D +          E+     
Sbjct: 21  WSSPIPYLFGGLAVMLAFVTVSLIILACSYRKSLFNHESRDDDHEDKTGAKKVEVMVDSD 80

Query: 296 EPKIVVIMAGDHMPTF 343
           EPKIVVIMAGD+ PTF
Sbjct: 81  EPKIVVIMAGDNNPTF 96


>ref|XP_003551789.1| PREDICTED: uncharacterized protein LOC100781671 [Glycine max]
          Length = 123

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = +2

Query: 95  PSSHSTNDKYHLWNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTNSES---EDIEKA 265
           PSS       ++W +PIPYLFGGLA M            C++RK  + S S   ED++  
Sbjct: 9   PSSPMRASGVNIWKSPIPYLFGGLAVMLAIISMALVILVCSYRKRDSQSSSEVNEDVKSQ 68

Query: 266 PNLSLPPAEMEPKIVVIMAGDHMPTF 343
              +      EP+++VIMAGDH PT+
Sbjct: 69  AMANNLETNSEPEVLVIMAGDHNPTY 94


>ref|XP_002530814.1| conserved hypothetical protein [Ricinus communis]
           gi|223529635|gb|EEF31582.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +2

Query: 86  MWPPSSHSTNDKYHLWNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKS-STNSESEDIEK 262
           M P S+ +T   +  W++P+PYLFGGLA M            C++RKS S  S  +  E+
Sbjct: 1   MRPVSNSTTTAGFWHWSSPMPYLFGGLALMLGVIAVALIILACSYRKSLSDESRGDGHEE 60

Query: 263 AP---NLSLPPAEMEPKIVVIMAGDHMPTF 343
            P      L     EPKIVVIMAGD  PTF
Sbjct: 61  KPGAKQAELTVDSDEPKIVVIMAGDDNPTF 90


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