BLASTX nr result

ID: Coptis23_contig00036137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036137
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-l...   120   9e-26
ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-l...   115   4e-24
ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-l...   114   8e-24
ref|XP_002509634.1| multidrug resistance pump, putative [Ricinus...   114   1e-23

>ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 468

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/103 (58%), Positives = 69/103 (66%)
 Frame = -3

Query: 350 MLLMAVIEVVNFPVVVSGGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXX 171
           M LMA++EV NFPV V GGIVRGTA PWL MYAN+ GFYFLALPLGV+ A          
Sbjct: 354 MFLMALVEVFNFPVTVCGGIVRGTARPWLGMYANIGGFYFLALPLGVVFAFKLRLGLAGL 413

Query: 170 XXXXXXXVIACLILLLVFVMRINWVDEADKAQQLACAGEEVTD 42
                  V+ACLILLL F++RINWV EA KAQ L C   +V +
Sbjct: 414 IIGFLIGVVACLILLLTFIVRINWVQEATKAQMLVCIPAQVQE 456


>ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 70/95 (73%)
 Frame = -3

Query: 350 MLLMAVIEVVNFPVVVSGGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXX 171
           MLLMA+IEVVNFP+ V GGIVRGTA PWL MYANL GFYFLALP+ V+LA          
Sbjct: 356 MLLMALIEVVNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPMAVLLAFKAALGLGGL 415

Query: 170 XXXXXXXVIACLILLLVFVMRINWVDEADKAQQLA 66
                  ++ACLILL+VFV+RI+W  EA+KAQ+LA
Sbjct: 416 LVGFLIGLVACLILLVVFVVRIDWEVEAEKAQKLA 450


>ref|XP_003516677.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 511

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/108 (54%), Positives = 72/108 (66%)
 Frame = -3

Query: 350 MLLMAVIEVVNFPVVVSGGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXX 171
           MLLMA++EV NFP+ V GGIVRGTA PWL MYANL GFYFLALPLGV+ A          
Sbjct: 392 MLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLCLGLVGL 451

Query: 170 XXXXXXXVIACLILLLVFVMRINWVDEADKAQQLACAGEEVTDTSGFE 27
                  ++ CL LLLVF+ R+NWV+EA KAQ L    E+V + S ++
Sbjct: 452 LIGLLTGIVTCLTLLLVFIARLNWVEEAAKAQTLT-GQEQVKELSKYD 498


>ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 525

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/96 (57%), Positives = 65/96 (67%)
 Frame = -3

Query: 350 MLLMAVIEVVNFPVVVSGGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXXX 171
           MLLMA++EV NFPV V GGIVRGT  PWL+MYA+L GFYFL LPLGV+ A          
Sbjct: 393 MLLMALVEVFNFPVTVCGGIVRGTGRPWLSMYASLGGFYFLTLPLGVVFAFKLRFGLGGL 452

Query: 170 XXXXXXXVIACLILLLVFVMRINWVDEADKAQQLAC 63
                  + ACL+LLL F++RINWV+EA KAQ   C
Sbjct: 453 LIGLLIGIAACLVLLLTFIVRINWVEEATKAQTFVC 488


>ref|XP_002509634.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549533|gb|EEF51021.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 506

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/101 (57%), Positives = 71/101 (70%)
 Frame = -3

Query: 353 MMLLMAVIEVVNFPVVVSGGIVRGTASPWLAMYANLSGFYFLALPLGVILAXXXXXXXXX 174
           MMLLMA+IEV+NFP+ V GG+VRGTA PWLAMY+NL GFY LALP+ V+LA         
Sbjct: 388 MMLLMALIEVINFPLAVCGGVVRGTARPWLAMYSNLGGFYLLALPVAVLLAFKARLGLGG 447

Query: 173 XXXXXXXXVIACLILLLVFVMRINWVDEADKAQQLACAGEE 51
                   + ACL LL+VF+MRI+W  EADKAQ+LA   +E
Sbjct: 448 LLLGFLVGLSACLALLVVFIMRIDWDVEADKAQKLASDVQE 488


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