BLASTX nr result

ID: Coptis23_contig00036130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036130
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839...   165   3e-39
ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [S...   162   2e-38
tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea m...   162   3e-38
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   157   7e-37

>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = -3

Query: 318  SILCSELKQLYVAITRTRQRLWICENMEEISRPMFDYWKKLGLVQTRQLDNSLAQAMQVA 139
            ++LCSELKQLYVAITRTRQRLWICEN+EE SRPMFDYW K GLVQ R+LD+SLAQAMQV+
Sbjct: 1472 NVLCSELKQLYVAITRTRQRLWICENVEEFSRPMFDYWTKKGLVQVRKLDDSLAQAMQVS 1531

Query: 138  SSKEEWSRRGIKLFNEGNFEMATMCFERAGDSNREKWARAAG 13
            SS EEW  +G KL  EGN+EMATMCFERAGD + EK ++AAG
Sbjct: 1532 SSPEEWKSQGYKLLREGNYEMATMCFERAGDEHGEKLSKAAG 1573


>ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839489 [Brachypodium
           distachyon]
          Length = 1806

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/102 (75%), Positives = 88/102 (86%)
 Frame = -3

Query: 315 ILCSELKQLYVAITRTRQRLWICENMEEISRPMFDYWKKLGLVQTRQLDNSLAQAMQVAS 136
           +LCSELKQLYVAITRTRQRLWICEN ++  RPMFDYWKKL LV+ R LD+SL QAMQ  S
Sbjct: 637 LLCSELKQLYVAITRTRQRLWICENTDDHCRPMFDYWKKLCLVEVRLLDSSLVQAMQTGS 696

Query: 135 SKEEWSRRGIKLFNEGNFEMATMCFERAGDSNREKWARAAGL 10
           S ++W  RG KLFNEG F+MATMCFE+AGD++REKWARAAGL
Sbjct: 697 STDDWRLRGTKLFNEGQFKMATMCFEKAGDAHREKWARAAGL 738


>ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
            gi|241938222|gb|EES11367.1| hypothetical protein
            SORBIDRAFT_06g027382 [Sorghum bicolor]
          Length = 1625

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/102 (73%), Positives = 87/102 (85%)
 Frame = -3

Query: 315  ILCSELKQLYVAITRTRQRLWICENMEEISRPMFDYWKKLGLVQTRQLDNSLAQAMQVAS 136
            +LCSELKQLYVAITRTRQRLWICEN ++  +PMFDYWKKL +V+ R LD+SL QAMQ  S
Sbjct: 1518 LLCSELKQLYVAITRTRQRLWICENADDYCQPMFDYWKKLCIVEVRLLDSSLIQAMQTGS 1577

Query: 135  SKEEWSRRGIKLFNEGNFEMATMCFERAGDSNREKWARAAGL 10
            S ++W  RG KLFNEG FEMATMCFE+AGD+ +EKWARAAGL
Sbjct: 1578 SADDWRLRGTKLFNEGQFEMATMCFEKAGDAYKEKWARAAGL 1619


>tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
          Length = 2606

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/102 (73%), Positives = 86/102 (84%)
 Frame = -3

Query: 315  ILCSELKQLYVAITRTRQRLWICENMEEISRPMFDYWKKLGLVQTRQLDNSLAQAMQVAS 136
            +LCSELKQLYVAITRTRQRLWICEN ++  +PMFDYWKKL +V+ R LD+SL QAMQ  S
Sbjct: 1562 LLCSELKQLYVAITRTRQRLWICENADDYCQPMFDYWKKLCIVEVRLLDSSLIQAMQTGS 1621

Query: 135  SKEEWSRRGIKLFNEGNFEMATMCFERAGDSNREKWARAAGL 10
            S ++W  RG KLFNEG FEMATMCFE+AGD+ RE WARAAGL
Sbjct: 1622 STDDWRLRGTKLFNEGQFEMATMCFEKAGDAYRENWARAAGL 1663


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  157 bits (398), Expect = 7e-37
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = -3

Query: 318  SILCSELKQLYVAITRTRQRLWICENMEEISRPMFDYWKKLGLVQTRQLDNSLAQAMQVA 139
            ++LCSELKQLYVAITRTRQRLWICEN  E ++P+FDYW+K  +VQ R+LDNSLA AMQVA
Sbjct: 1646 NVLCSELKQLYVAITRTRQRLWICENAAEFAKPIFDYWRKKAVVQVRKLDNSLALAMQVA 1705

Query: 138  SSKEEWSRRGIKLFNEGNFEMATMCFERAGDSNREKWARAAGLRS 4
            SS EEW  +G KL  E N+EMATMCFERAGD+  EK A+AAGL++
Sbjct: 1706 SSPEEWKSQGYKLLREANYEMATMCFERAGDAYGEKLAKAAGLKA 1750


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