BLASTX nr result

ID: Coptis23_contig00036115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036115
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g0264...   122   3e-26
emb|CBI31681.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]   122   3e-26
emb|CBI29170.3| unnamed protein product [Vitis vinifera]              122   4e-26

>ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 551

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +3

Query: 39  SMSNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYW 218
           S S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH W
Sbjct: 5   SNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRW 64

Query: 219 RQELYEMERYKLAAAKRSQKRHHNVKF 299
           R ELYEMERYKLAAAKR QK   ++KF
Sbjct: 65  RPELYEMERYKLAAAKRIQKNLQSLKF 91


>emb|CBI31681.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +3

Query: 39  SMSNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYW 218
           S S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH W
Sbjct: 5   SNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRW 64

Query: 219 RQELYEMERYKLAAAKRSQKRHHNVKF 299
           R ELYEMERYKLAAAKR QK   ++KF
Sbjct: 65  RPELYEMERYKLAAAKRIQKNLQSLKF 91


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = +3

Query: 21  SQPSITSMSNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAI 200
           S  S  S  +FDE RW+I+IRRTL          PVCIFNVPK LM+S P+ Y PQ++AI
Sbjct: 6   SNMSSNSNLSFDEHRWIINIRRTLEEELENDAEIPVCIFNVPKALMTSDPDSYTPQEVAI 65

Query: 201 GPYHYWRQELYEMERYKLAAAKRSQKRHHNVKFQ 302
           GPYH+WR ELYEMERYKLAAAKR+QK+  ++KFQ
Sbjct: 66  GPYHHWRPELYEMERYKLAAAKRTQKKIQSLKFQ 99


>emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]
          Length = 551

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +3

Query: 39  SMSNFDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGPYHYW 218
           S S+FDEL WVI IRRTL          PVCIFNVPKTLM++KP+ YVPQ++A+GPYH W
Sbjct: 5   SNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRW 64

Query: 219 RQELYEMERYKLAAAKRSQKRHHNVKF 299
           R ELYEMERYKLAAAKR QK   ++KF
Sbjct: 65  RPELYEMERYKLAAAKRIQKHLQSLKF 91


>emb|CBI29170.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
 Frame = +3

Query: 33  ITSMSN--FDELRWVIHIRRTLXXXXXXXXXFPVCIFNVPKTLMSSKPEVYVPQQLAIGP 206
           +TS SN  FDELRWVI IRRTL          PV I+NVPKTLM++KP+ YVPQ++A+GP
Sbjct: 1   MTSNSNPSFDELRWVIEIRRTLDEELEEDSEVPVNIYNVPKTLMATKPDCYVPQEVALGP 60

Query: 207 YHYWRQELYEMERYKLAAAKRSQKRHHNVKFQ 302
           YH+WR ELYEMERYKLAAAKR+QK    VKF+
Sbjct: 61  YHHWRPELYEMERYKLAAAKRTQKHLQRVKFE 92


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