BLASTX nr result

ID: Coptis23_contig00036110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036110
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|2...   294   4e-78
ref|XP_002526639.1| polygalacturonase, putative [Ricinus communi...   292   2e-77
ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|2...   291   3e-77
ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [...   283   8e-75
emb|CBI37530.3| unnamed protein product [Vitis vinifera]              283   8e-75

>ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|222856479|gb|EEE94026.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  294 bits (753), Expect = 4e-78
 Identities = 136/154 (88%), Positives = 148/154 (96%)
 Frame = -2

Query: 463 GKMWWDLWWNRTLEHTRGHLVELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTIL 284
           GKMWW+LWWNRTLEHTRGHLVELMNSQ+ILISNLTF NSPFWTIHP+YCSN+VVK MTIL
Sbjct: 120 GKMWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTIL 179

Query: 283 APLNSPNTDGIDPDSSTHVCIEDCYIESGDDLVAVKSGWDHYGIKMARPSSDIMVRNVSG 104
           APLN+PNTDGIDPDSST+VCIEDCYIESGDDLVAVKSGWD YGIKMARPSS+I++R VSG
Sbjct: 180 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSG 239

Query: 103 TTPTCSGVGIGSEMSGGIFDVVIENLHVINSAAG 2
           TTPTCSGVGIGSEMSGGIF+V IE+LHV +SAAG
Sbjct: 240 TTPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAG 273


>ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
           gi|223534031|gb|EEF35751.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 480

 Score =  292 bits (747), Expect = 2e-77
 Identities = 136/154 (88%), Positives = 146/154 (94%)
 Frame = -2

Query: 463 GKMWWDLWWNRTLEHTRGHLVELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTIL 284
           GKMWW+LWWNRTLEHTRGHLVELMNS NILISNLTF NSPFWTIHPVYCSNVVVK MTIL
Sbjct: 197 GKMWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTIL 256

Query: 283 APLNSPNTDGIDPDSSTHVCIEDCYIESGDDLVAVKSGWDHYGIKMARPSSDIMVRNVSG 104
           APLN+PNTDGIDPDSST+VCIEDCYIESGDDLVAVKSGWD YGIK ARPSS I+VR VSG
Sbjct: 257 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSG 316

Query: 103 TTPTCSGVGIGSEMSGGIFDVVIENLHVINSAAG 2
           TTPTCSGVGIGSEMSGGIF+V+I++LH+ +SAAG
Sbjct: 317 TTPTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAG 350


>ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|222853420|gb|EEE90967.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  291 bits (746), Expect = 3e-77
 Identities = 135/154 (87%), Positives = 146/154 (94%)
 Frame = -2

Query: 463 GKMWWDLWWNRTLEHTRGHLVELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTIL 284
           GKMWW+LWWNRTLEHTRGHLVELMNS NILI+NLTF N+PFWTIHPVYCSNVVVK MTIL
Sbjct: 154 GKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDMTIL 213

Query: 283 APLNSPNTDGIDPDSSTHVCIEDCYIESGDDLVAVKSGWDHYGIKMARPSSDIMVRNVSG 104
           APL +PNTDGIDPDSST+VCIEDCYIESGDDLVAVKSGWD YGIKMARPSS+I+VR VSG
Sbjct: 214 APLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSG 273

Query: 103 TTPTCSGVGIGSEMSGGIFDVVIENLHVINSAAG 2
           TTPTCSGVGIGSEMSGGIF++ IE+LHV +SAAG
Sbjct: 274 TTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAG 307


>ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 477

 Score =  283 bits (725), Expect = 8e-75
 Identities = 129/154 (83%), Positives = 145/154 (94%)
 Frame = -2

Query: 463 GKMWWDLWWNRTLEHTRGHLVELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTIL 284
           G+MWW+LWWNRTLEHTRGHL+EL++S N+LISNLTF NSPFWTIHPVYCSNVVVKGMTIL
Sbjct: 194 GRMWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTIL 253

Query: 283 APLNSPNTDGIDPDSSTHVCIEDCYIESGDDLVAVKSGWDHYGIKMARPSSDIMVRNVSG 104
           APLN+PNTDGIDPDSST+VCIED YIESGDDLVA+KSGWDHYGI MA PS++I+VR +SG
Sbjct: 254 APLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISG 313

Query: 103 TTPTCSGVGIGSEMSGGIFDVVIENLHVINSAAG 2
           TTPTCSGVGIGSEMSGGI ++ IENLHV +SAAG
Sbjct: 314 TTPTCSGVGIGSEMSGGISNITIENLHVWDSAAG 347


>emb|CBI37530.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  283 bits (725), Expect = 8e-75
 Identities = 129/154 (83%), Positives = 145/154 (94%)
 Frame = -2

Query: 463 GKMWWDLWWNRTLEHTRGHLVELMNSQNILISNLTFLNSPFWTIHPVYCSNVVVKGMTIL 284
           GKMWW+LWWNRTLEHTRGHL+E+ NS NILISNLTF+NSPFWTIHPVYCSNVV+K +TIL
Sbjct: 196 GKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTIL 255

Query: 283 APLNSPNTDGIDPDSSTHVCIEDCYIESGDDLVAVKSGWDHYGIKMARPSSDIMVRNVSG 104
           APLN+PNTDGIDPDSST+VCIEDCYIESGDDLVAVKSGWD YGI MARPSS+I+VR +SG
Sbjct: 256 APLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSG 315

Query: 103 TTPTCSGVGIGSEMSGGIFDVVIENLHVINSAAG 2
           TTPTCSGVGIGSEMSGGI +V +E+LH+ +SAAG
Sbjct: 316 TTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAG 349


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