BLASTX nr result

ID: Coptis23_contig00036095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036095
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522682.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    68   1e-18
ref|XP_003526469.1| PREDICTED: serine/threonine-protein kinase A...    68   2e-18
ref|XP_002516588.1| afc, putative [Ricinus communis] gi|22354440...    67   2e-18
ref|XP_004160781.1| PREDICTED: serine/threonine-protein kinase A...    67   3e-18
ref|XP_004138782.1| PREDICTED: serine/threonine-protein kinase A...    67   3e-18

>ref|XP_003522682.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           AFC3-like [Glycine max]
          Length = 398

 Score = 68.2 bits (165), Expect(2) = 1e-18
 Identities = 35/62 (56%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
 Frame = +2

Query: 8   WDVEPSSSSTTTNSKAI-----IRLAPVSPPLREDDSKGHYVFNYGENLTRRYKILSKMG 172
           WDV P S S    +  +          VSPP R+DD +GHYVFN GENLT RYKILSKMG
Sbjct: 22  WDVAPPSVSEAQRALPVPGDEEFERKHVSPPKRDDDREGHYVFNLGENLTPRYKILSKMG 81

Query: 173 EG 178
           EG
Sbjct: 82  EG 83



 Score = 49.7 bits (117), Expect(2) = 1e-18
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +1

Query: 244 GTFGRVLECWDRQTHELLAIKVVRS 318
           GTFGRVLECWDRQT E +AIKVVRS
Sbjct: 83  GTFGRVLECWDRQTREYVAIKVVRS 107


>ref|XP_003526469.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Glycine max]
          Length = 403

 Score = 67.8 bits (164), Expect(2) = 2e-18
 Identities = 34/62 (54%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
 Frame = +2

Query: 8   WDVEPSSSSTTTNSKAI-----IRLAPVSPPLREDDSKGHYVFNYGENLTRRYKILSKMG 172
           WDV P S+S    +  +          VSPP R+DD +GHYVFN GENLT RYKIL KMG
Sbjct: 22  WDVAPPSASEAQRALPVPGDEGFERKHVSPPKRDDDREGHYVFNLGENLTPRYKILGKMG 81

Query: 173 EG 178
           EG
Sbjct: 82  EG 83



 Score = 49.7 bits (117), Expect(2) = 2e-18
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +1

Query: 244 GTFGRVLECWDRQTHELLAIKVVRS 318
           GTFGRVLECWDRQT E +AIKVVRS
Sbjct: 83  GTFGRVLECWDRQTREYVAIKVVRS 107


>ref|XP_002516588.1| afc, putative [Ricinus communis] gi|223544408|gb|EEF45929.1| afc,
           putative [Ricinus communis]
          Length = 403

 Score = 67.4 bits (163), Expect(2) = 2e-18
 Identities = 34/61 (55%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = +2

Query: 8   WDVEPSSSSTTTNSKAIIRLAPV----SPPLREDDSKGHYVFNYGENLTRRYKILSKMGE 175
           WDV+PS          +    P     SPP R+DD +GHYVFN GENLT RYKILSKMGE
Sbjct: 22  WDVKPSEPEVQRALAIVGNEGPTTRHASPPRRDDDREGHYVFNLGENLTPRYKILSKMGE 81

Query: 176 G 178
           G
Sbjct: 82  G 82



 Score = 49.7 bits (117), Expect(2) = 2e-18
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +1

Query: 244 GTFGRVLECWDRQTHELLAIKVVRS 318
           GTFGRVLECWDRQT E +AIKVVRS
Sbjct: 82  GTFGRVLECWDRQTREYVAIKVVRS 106


>ref|XP_004160781.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis
           sativus]
          Length = 400

 Score = 66.6 bits (161), Expect(2) = 3e-18
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = +2

Query: 8   WDVEPSSSSTTTNSKAIIR---LAPVSPPLREDDSKGHYVFNYGENLTRRYKILSKMGEG 178
           WDV P +      + A+++      VSPP R+DD +GHYVFN GENLT RYKILSKMGEG
Sbjct: 22  WDVVPPAQEAN-KALAVVKNEVKRHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 80



 Score = 49.7 bits (117), Expect(2) = 3e-18
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +1

Query: 244 GTFGRVLECWDRQTHELLAIKVVRS 318
           GTFGRVLECWDRQT E +AIKVVRS
Sbjct: 80  GTFGRVLECWDRQTREYVAIKVVRS 104


>ref|XP_004138782.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis
           sativus]
          Length = 400

 Score = 66.6 bits (161), Expect(2) = 3e-18
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
 Frame = +2

Query: 8   WDVEPSSSSTTTNSKAIIR---LAPVSPPLREDDSKGHYVFNYGENLTRRYKILSKMGEG 178
           WDV P +      + A+++      VSPP R+DD +GHYVFN GENLT RYKILSKMGEG
Sbjct: 22  WDVVPPAQEAN-KALAVVKNEVKRHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 80



 Score = 49.7 bits (117), Expect(2) = 3e-18
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +1

Query: 244 GTFGRVLECWDRQTHELLAIKVVRS 318
           GTFGRVLECWDRQT E +AIKVVRS
Sbjct: 80  GTFGRVLECWDRQTREYVAIKVVRS 104


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