BLASTX nr result

ID: Coptis23_contig00036093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036093
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306950.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08
emb|CCG34083.1| SCF ubiquitin ligase [uncultured eukaryote]            62   5e-08
ref|XP_001753031.1| predicted protein [Physcomitrella patens sub...    62   5e-08
ref|XP_001753554.1| predicted protein [Physcomitrella patens sub...    62   5e-08
ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|1...    62   5e-08

>ref|XP_002306950.1| predicted protein [Populus trichocarpa] gi|118487452|gb|ABK95554.1|
           unknown [Populus trichocarpa]
           gi|222856399|gb|EEE93946.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +3

Query: 3   ANYLNIKNLIDLASQRIANIIKKKSPEEIARMFNVKYDFTPXXXXXXXXXKAENHW 170
           ANYLNIKNL+DL  QR+A++IK K+PEEI + FN+K DFTP         + EN W
Sbjct: 102 ANYLNIKNLLDLTCQRVADMIKGKTPEEIRKTFNIKNDFTP---EEEEEVRRENQW 154


>emb|CCG34083.1| SCF ubiquitin ligase [uncultured eukaryote]
          Length = 158

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ANYLNIKNLIDLASQRIANIIKKKSPEEIARMFNVKYDFTPXXXXXXXXXKAENHW 170
           ANYLNIKNL+DL  Q +A++IK K+PEEI + FN+K DFTP         + EN W
Sbjct: 103 ANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP---EEEEEVRRENQW 155


>ref|XP_001753031.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695730|gb|EDQ82072.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 157

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ANYLNIKNLIDLASQRIANIIKKKSPEEIARMFNVKYDFTPXXXXXXXXXKAENHW 170
           ANYLNIKNL+DL  Q +A++IK K+PEEI + FN+K DFTP         + EN W
Sbjct: 102 ANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP---EEEEEVRRENQW 154


>ref|XP_001753554.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695433|gb|EDQ81777.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 158

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ANYLNIKNLIDLASQRIANIIKKKSPEEIARMFNVKYDFTPXXXXXXXXXKAENHW 170
           ANYLNIKNL+DL  Q +A++IK K+PEEI + FN+K DFTP         + EN W
Sbjct: 103 ANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP---EEEEEVRRENQW 155


>ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|118485200|gb|ABK94461.1|
           unknown [Populus trichocarpa]
           gi|222843680|gb|EEE81227.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   ANYLNIKNLIDLASQRIANIIKKKSPEEIARMFNVKYDFTPXXXXXXXXXKAENHW 170
           ANYLNIKNL+DL  Q +A++IK K+PEEI + FN+K DFTP         + EN W
Sbjct: 102 ANYLNIKNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTP---EEEEEVRRENQW 154


Top