BLASTX nr result

ID: Coptis23_contig00036070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036070
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   186   4e-45
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...   176   5e-42
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   172   7e-41
emb|CBI27491.3| unnamed protein product [Vitis vinifera]              172   7e-41

>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  186 bits (473), Expect = 4e-45
 Identities = 118/277 (42%), Positives = 156/277 (56%), Gaps = 24/277 (8%)
 Frame = -2

Query: 760  RSFVALKTLFIKQIVLGFLLKLAGGWRPKRRCFYALSPSLCKYVKLYKVHGLYLVCTTDI 581
            +SF  L ++  K   L  LLKL+ GWRPK +   ++  S  + +K YKV GLY++C+ DI
Sbjct: 910  KSFGKLSSVRKKTSALNLLLKLSSGWRPKTKNVDSICHSY-RLLKQYKVEGLYIICSIDI 968

Query: 580  ATESKFIQVLRIWDVLPLMEIPNVVVKLEKMTYLFSDYYMKRCLEQKYEGNLVVPMGWNI 401
              E  + QVL++WD+LPL +IP +  +L+ +   ++D +M RC E+  EGNL VP  W+ 
Sbjct: 969  VKERMYTQVLKVWDILPLEDIPRLAKRLDGIFGSYTDDFMNRCKEKCLEGNLEVPKTWST 1028

Query: 400  CSDFVKYKCAA--------SLPD---LENSKVNESLLLMKFYXXXXXXXXXXXKACDGRE 254
              D V+YK           S  D   +ENSKV +SLLLMKFY              DGRE
Sbjct: 1029 SIDIVRYKSLGNNEVGSNLSSDDGCYVENSKVTDSLLLMKFYSLSSGVVSHLLSDRDGRE 1088

Query: 253  IELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEYVEALHGIVPFNW-- 80
            +ELPFEV+D ELEI+   RS F+LGRSGTGKT I  MKL K+EQ Y  A+ G    N   
Sbjct: 1089 LELPFEVTDEELEIILLQRSTFILGRSGTGKTTILTMKLFKKEQIYHMAMEGYDDENGKT 1148

Query: 79   ----FLYHNKRCE-NNAVAGYG------LRQIFITVS 2
                FL   K  E   A +  G      L Q+F+TVS
Sbjct: 1149 SKEIFLKDRKVDETKTAESSIGGAKNAVLHQLFVTVS 1185


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  179 bits (454), Expect = 6e-43
 Identities = 111/275 (40%), Positives = 155/275 (56%), Gaps = 22/275 (8%)
 Frame = -2

Query: 760  RSFVALKTLFIKQIVLGFLLKLAGGWRPKRRCFYALSPSLCKYVKLYKVHGLYLVCTTDI 581
            +SF  L ++  K  VL  LLKL+ GWRPK+R    +  S  + +K +KV GLY++C+ DI
Sbjct: 737  KSFGKLASVRKKTPVLNLLLKLSSGWRPKKRSVDFICGSSSQILKQFKVEGLYVICSIDI 796

Query: 580  ATESKFIQVLRIWDVLPLMEIPNVVVKLEKMTYLFSDYYMKRCLEQKYEGNLVVPMGWNI 401
              E  + QVL++WD+L L +IP +  +LE +   ++D ++  C E+  EG+L VP  W  
Sbjct: 797  VKEICYTQVLKVWDLLALEDIPILAKRLEGIFETYTDDFISHCNEKCLEGDLEVPKTWRT 856

Query: 400  CSDFVKYKCAA---------SLPD----LENSKVNESLLLMKFYXXXXXXXXXXXKACDG 260
              D  +YK  +         S PD    +ENSKV++SLLLMKFY              DG
Sbjct: 857  SFDIPRYKSCSNNEIRSNSNSGPDGPYYVENSKVSDSLLLMKFYPLSPGVASHLLSDRDG 916

Query: 259  REIELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEYVEALHGIVPFNW 80
            RE+ELPFEV+D ELEI+   RS F+LGRSGTGKT +  MKL K+E+ Y  A  G +  + 
Sbjct: 917  RELELPFEVTDEELEIIIFQRSTFILGRSGTGKTTVLTMKLFKKEELYYTATQGYLNTSK 976

Query: 79   -FLYHNKRCENNAVAGYG--------LRQIFITVS 2
                 N   ++    G G        LRQ+F+TVS
Sbjct: 977  DSSRRNNVADDIKSVGDGVGDAKETVLRQLFVTVS 1011


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score =  176 bits (446), Expect = 5e-42
 Identities = 106/274 (38%), Positives = 159/274 (58%), Gaps = 21/274 (7%)
 Frame = -2

Query: 760  RSFVALKTLFIKQIVLGFLLKLAGGWRPKRRCFYALSPSLCKYVKLYKVHGLYLVCTTDI 581
            +SF  L++   K++VL  LLKL+ GWRPKR     L  +  + +K +KV  L++VC+TDI
Sbjct: 898  KSFKKLRSKQTKKLVLDLLLKLSTGWRPKRMKVDLLCGNSSQILKQFKVESLFVVCSTDI 957

Query: 580  ATESKFIQVLRIWDVLPLMEIPNVVVKLEKMTYLFSDYYMKRCLEQKYEGNLVVPMGWNI 401
              ES + QVL+IWD++PL ++P +V +L+ +   ++D ++  C E+  EGN+VVP+ W  
Sbjct: 958  VKESMYTQVLKIWDIMPLEDVPKLVKRLDNIFGSYTDEFISCCSEKCLEGNMVVPISWER 1017

Query: 400  CSDFVKYKCAASLPD------------LENSKVNESLLLMKFYXXXXXXXXXXXKACDGR 257
             ++  K+K   +  +            +ENSKV ESLLLMKFY                 
Sbjct: 1018 STEITKFKTLDNNGNEAELSGCDQRIYVENSKVEESLLLMKFYSLSSVVISHLLSDRISD 1077

Query: 256  EIELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEY---VEALHGI--- 95
            E +LPFEVSD E +I+  P+S FVLGRSGTGKT +  +KL ++E ++   VE  +GI   
Sbjct: 1078 EFDLPFEVSDEEYDIILFPKSTFVLGRSGTGKTTVLTVKLFQKEYKHHMAVEETYGINSA 1137

Query: 94   -VPFNWFLYHNKRCENNAVAGYG--LRQIFITVS 2
             VP    L H+K  + ++       L Q+F+TVS
Sbjct: 1138 AVP---CLNHDKEYKKSSTTNDRPVLHQLFVTVS 1168


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  172 bits (436), Expect = 7e-41
 Identities = 109/273 (39%), Positives = 152/273 (55%), Gaps = 20/273 (7%)
 Frame = -2

Query: 760  RSFVALKTLFIKQIVLGFLLKLAGGWRPKRRCFYALSPSLCKYVKLYKVHGLYLVCTTDI 581
            +SFV L++   K+ V+  LL L+ GWRPKR     +  S  + +K +KV G Y+VC+ DI
Sbjct: 909  KSFVKLRSDRTKKSVMKLLLNLSSGWRPKRLNIDRVCGSSSQILKQFKVEGFYIVCSIDI 968

Query: 580  ATESKFIQVLRIWDVLPLMEIPNVVVKLEKMTYLFSDYYMKRCLEQKYEGNLVVPMGWNI 401
                K  QVLR+WD+LPL +I  +V  L+ +   ++D ++ RC E+  + NL VP  W  
Sbjct: 969  V---KNTQVLRVWDILPLEDILKLVKHLDNIFQRYTDDFINRCKEKCLDRNLEVPRTWAT 1025

Query: 400  CSDFVKYK--C--------AASLPD----LENSKVNESLLLMKFYXXXXXXXXXXXKACD 263
             SD V++K  C        +A   D    +ENSKV+ESLLLMKFY              D
Sbjct: 1026 SSDIVQFKNFCKEESQGNESADAFDGRSYVENSKVSESLLLMKFYSLSTGMVRHLLSDHD 1085

Query: 262  GREIELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEYVEALHGIVPFN 83
            GRE++LPFEV+D E +I+   RS F+LGRSGTGKT +  MKL ++EQ++  A+ G     
Sbjct: 1086 GRELDLPFEVTDQEQDIILYYRSTFILGRSGTGKTTVLTMKLFQKEQQHHMAMEGFQEDK 1145

Query: 82   WFLYHNKRCENNAVAGYG------LRQIFITVS 2
                 N    N      G      LRQ+F+TVS
Sbjct: 1146 GNASTNATYRNEVGTSVGKIQVAVLRQLFVTVS 1178


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  172 bits (436), Expect = 7e-41
 Identities = 109/273 (39%), Positives = 152/273 (55%), Gaps = 20/273 (7%)
 Frame = -2

Query: 760  RSFVALKTLFIKQIVLGFLLKLAGGWRPKRRCFYALSPSLCKYVKLYKVHGLYLVCTTDI 581
            +SFV L++   K+ V+  LL L+ GWRPKR     +  S  + +K +KV G Y+VC+ DI
Sbjct: 4292 KSFVKLRSDRTKKSVMKLLLNLSSGWRPKRLNIDRVCGSSSQILKQFKVEGFYIVCSIDI 4351

Query: 580  ATESKFIQVLRIWDVLPLMEIPNVVVKLEKMTYLFSDYYMKRCLEQKYEGNLVVPMGWNI 401
                K  QVLR+WD+LPL +I  +V  L+ +   ++D ++ RC E+  + NL VP  W  
Sbjct: 4352 V---KNTQVLRVWDILPLEDILKLVKHLDNIFQRYTDDFINRCKEKCLDRNLEVPRTWAT 4408

Query: 400  CSDFVKYK--C--------AASLPD----LENSKVNESLLLMKFYXXXXXXXXXXXKACD 263
             SD V++K  C        +A   D    +ENSKV+ESLLLMKFY              D
Sbjct: 4409 SSDIVQFKNFCKEESQGNESADAFDGRSYVENSKVSESLLLMKFYSLSTGMVRHLLSDHD 4468

Query: 262  GREIELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEYVEALHGIVPFN 83
            GRE++LPFEV+D E +I+   RS F+LGRSGTGKT +  MKL ++EQ++  A+ G     
Sbjct: 4469 GRELDLPFEVTDQEQDIILYYRSTFILGRSGTGKTTVLTMKLFQKEQQHHMAMEGFQEDK 4528

Query: 82   WFLYHNKRCENNAVAGYG------LRQIFITVS 2
                 N    N      G      LRQ+F+TVS
Sbjct: 4529 GNASTNATYRNEVGTSVGKIQVAVLRQLFVTVS 4561



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 60/162 (37%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
 Frame = -2

Query: 427 LVVPMGWNICSDFVKYKCA--------------ASLPDLENSKVNESLLLMKFYXXXXXX 290
           L +PM W    D V+YK                A     ENS V+ES L+MKFY      
Sbjct: 242 LEIPMSWTTSYDIVQYKSLSNNATGKISNVSGLARRGGFENSIVSESFLIMKFYSVTFNM 301

Query: 289 XXXXXKACDGREIELPFEVSDLELEIVKCPRSAFVLGRSGTGKTIISIMKLMKREQEYVE 110
                   DGRE++LPFE++D E E +   RS+F+LGRSGTGKT +  MKL ++EQ +  
Sbjct: 302 VRHFISGHDGRELDLPFELTDQERETIFFNRSSFILGRSGTGKTTVLSMKLFQKEQLFHI 361

Query: 109 ALHGI--VPFNWFLYHNKRCE----NNAVAGYGLRQIFITVS 2
           A  G+  V  +   + ++R E         G  L Q+F+TVS
Sbjct: 362 ASEGLYEVEGHSSTHASQRNEIGECTGDAKGACLHQLFVTVS 403


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