BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036064
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     154   9e-36
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         149   3e-34
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   142   2e-32

>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/85 (84%), Positives = 80/85 (94%)
 Frame = -1

Query: 255 EIAKAAKQGFHSDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPN 76
           EIAKAAK+G  SDRQLCYVAFDILYVGDTSVIHQ+LKERHELL+KVVKPLKGR EILVP+
Sbjct: 321 EIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVPS 380

Query: 75  GGLNAHRPPGEPCWSLIAYNVEEVQ 1
           GGLN HRP GEPCWSLIAY+V++V+
Sbjct: 381 GGLNTHRPSGEPCWSLIAYDVDDVE 405


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 EIAKAAKQGFHSDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPN 76
           EIAKAA+ G  SDRQLCYVAFDILYVGDTSVIHQ+LKERHELLRKVVKP+KGRLEILVPN
Sbjct: 330 EIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEILVPN 389

Query: 75  GGLNAHRPPGEPCWSLIAYNVEEVQ 1
           GGLNAHR PGEP  SLIAYNV++++
Sbjct: 390 GGLNAHRLPGEPYCSLIAYNVDDIE 414


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 EIAKAAKQGFHSDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPN 76
           EIAKAA+ G  SDRQLCYVAFDILYVGDTSVIHQ+LKERHELLRKVVKP+KGRLEILVPN
Sbjct: 330 EIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHELLRKVVKPVKGRLEILVPN 389

Query: 75  GGLNAHRPPGEPCWSLIAYNVEEVQ 1
           GGLNAHR PGEP  SLIAYNV++++
Sbjct: 390 GGLNAHRLPGEPYCSLIAYNVDDIE 414


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/86 (82%), Positives = 79/86 (91%), Gaps = 1/86 (1%)
 Frame = -1

Query: 255 EIAKAAKQGFHSDRQ-LCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVP 79
           EIAKAAK+G  SDRQ L YVAFDILYVGDTSVIHQ+LKERHELL+KVVKPLKGR EILVP
Sbjct: 321 EIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKERHELLQKVVKPLKGRFEILVP 380

Query: 78  NGGLNAHRPPGEPCWSLIAYNVEEVQ 1
           +GGLN HRP GEPCWSLIAY+V++V+
Sbjct: 381 SGGLNTHRPSGEPCWSLIAYDVDDVE 406


>ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like
           [Brachypodium distachyon]
          Length = 1249

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -1

Query: 255 EIAKAAKQGFHSDRQLCYVAFDILYVGDTSVIHQSLKERHELLRKVVKPLKGRLEILVPN 76
           EIAKAA+ G  +DRQLCYVAFDILY GDTSVIHQSL ERHE+LRKVVKPLKG LEILVP 
Sbjct: 349 EIAKAARDGLETDRQLCYVAFDILYAGDTSVIHQSLTERHEILRKVVKPLKGHLEILVPT 408

Query: 75  GGLNAHRPPGEPCWSLIAYNVEEVQ 1
           GGLN HRP  EPCWS+ A+N+E+ +
Sbjct: 409 GGLNVHRPSDEPCWSIFAHNIEDAE 433