BLASTX nr result

ID: Coptis23_contig00036062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036062
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...    70   1e-10
ref|XP_002521431.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsu...    66   3e-09
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]            65   4e-09
ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...    65   6e-09

>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +1

Query: 121 FVISRSNWTVSRRDSTEIPNEILPLSTEKPLVSVRFGHRKPVKSSPEGGRVLGVTKP 291
           F ISRS+WT  R+DS E    ++P   EKPLVS+RFGHR+ VKSSPE G+VLGV+KP
Sbjct: 153 FTISRSSWTPERKDSME---NMIP--AEKPLVSMRFGHRRAVKSSPEAGKVLGVSKP 204


>ref|XP_002521431.1| conserved hypothetical protein [Ricinus communis]
           gi|223539330|gb|EEF40921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +1

Query: 121 FVISRSNWTVSRR-DSTEIPNEILPLSTEKPLVSVRFGHRKPVKSSPEGGRVLGVTKP 291
           FVIS+S W  S+R D +E   E+L +  EKPL+S RFGHRKPVK+SPEGGR L V KP
Sbjct: 160 FVISKSTWVPSKRIDPSESQPELL-IPAEKPLISARFGHRKPVKASPEGGRALRVAKP 216


>gb|AAC33277.1| cotton fiber expressed protein 2 [Gossypium hirsutum]
          Length = 275

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/58 (63%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +1

Query: 121 FVISRSNWTV-SRRDSTEIPNEILPLSTEKPLVSVRFGHRKPVKSSPEGGRVLGVTKP 291
           FVIS+S W   SR DS+EIP + L L  EKP  S RFGHRKPVK +PEGGR L V KP
Sbjct: 153 FVISKSEWIPPSRTDSSEIPLDAL-LIQEKPAPSSRFGHRKPVKVNPEGGRALKVAKP 209


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +1

Query: 121 FVISRSNWTV-SRRDSTEIPNEILPLSTEKPLVSVRFGHRKPVKSSPEGGRVLGVTKP 291
           FVIS+S W   SR DS+EIP + L L  EKP  S RFGHRKPVK++PEGGR L   KP
Sbjct: 153 FVISKSEWIPPSRTDSSEIPLDAL-LIQEKPAPSSRFGHRKPVKANPEGGRALKAAKP 209


>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = +1

Query: 154 RRDSTEIPNEILPLSTEKPLVSVRFGHRKPVKSSPE--GGRVLGVTKP 291
           RR+S+EIP E L LSTEKPLVS RFGHRKP+K+SPE  GG+VL V+KP
Sbjct: 163 RRESSEIPLECL-LSTEKPLVSSRFGHRKPIKASPEASGGKVLRVSKP 209


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