BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036050
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   128   4e-28
ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002336601.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...    91   5e-17

>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
 Frame = +1

Query: 103 TVSHILKIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 279
           T S IL+IHAQLITT+LISDTFA SRL+ +  S T  +NYAELVF QI +P++FI N+M+
Sbjct: 23  TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82

Query: 280 RGYVESSKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEG 420
           + Y ESS P  A  F++ MRR+ ++GD++TYPFVLKACG M G+ EG
Sbjct: 83  KCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEG 129


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/107 (58%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
 Frame = +1

Query: 103 TVSHILKIHAQLITTHLISDTFAVSRLIVATTS-TQQMNYAELVFMQIQKPHAFIYNSMI 279
           T S IL+IHAQLITT+LISDTFA SRL+ +  S T  +NYAELVF QI +P++FI N+M+
Sbjct: 23  TSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMV 82

Query: 280 RGYVESSKPRNAFEFFSRMRREAVIGDSFTYPFVLKACGLMLGVKEG 420
           + Y ESS P  A  F++ MR++ ++GD++TYPFVLKACG M G+ EG
Sbjct: 83  KCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEG 129


>ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|222867392|gb|EEF04523.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/97 (46%), Positives = 62/97 (63%)
 Frame = +1

Query: 103 TVSHILKIHAQLITTHLISDTFAVSRLIVATTSTQQMNYAELVFMQIQKPHAFIYNSMIR 282
           T+SH+  IHA LI  H I D FA S LI  + +   ++YA  VF QIQ P+ FIYNS IR
Sbjct: 27  TLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIR 86

Query: 283 GYVESSKPRNAFEFFSRMRREAVIGDSFTYPFVLKAC 393
           G+  S  P  +F F+ + +R  ++ D+ TYPF++KAC
Sbjct: 87  GFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKAC 123


>ref|XP_002336601.1| predicted protein [Populus trichocarpa] gi|222836288|gb|EEE74709.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/97 (46%), Positives = 62/97 (63%)
 Frame = +1

Query: 103 TVSHILKIHAQLITTHLISDTFAVSRLIVATTSTQQMNYAELVFMQIQKPHAFIYNSMIR 282
           T+SH+  IHA LI  H I D FA S LI  + +   ++YA  VF QIQ P+ FIYNS IR
Sbjct: 27  TLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIR 86

Query: 283 GYVESSKPRNAFEFFSRMRREAVIGDSFTYPFVLKAC 393
           G+  S  P  +F F+ + +R  ++ D+ TYPF++KAC
Sbjct: 87  GFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKAC 123


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score = 91.3 bits (225), Expect(2) = 5e-17
 Identities = 42/100 (42%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
 Frame = +1

Query: 106 VSHILKIHAQLITTHLISDTFAVSRLIV----ATTSTQQMNYAELVFMQIQKPHAFIYNS 273
           ++H+  IHA +I TH+I D FA SRLI      ++ T  ++YA  +F QIQ P+ FI+N+
Sbjct: 30  LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNA 89

Query: 274 MIRGYVESSKPRNAFEFFSRMRREAVIGDSFTYPFVLKAC 393
           MIRG+  S  P  AF F+ + +R+ ++ D+ T+PF++K+C
Sbjct: 90  MIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSC 129



 Score = 21.2 bits (43), Expect(2) = 5e-17
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 42  SSIFKTHLKKSTSLTSPKQQNSLTH 116
           SS+FKT   K+  L S +  + LTH
Sbjct: 8   SSVFKTLRLKNPKLFSLETCSDLTH 32