BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036047
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   210   1e-52
ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...   201   7e-50
ref|NP_197021.2| tyrosyl-DNA phosphodiesterase 1 [Arabidopsis th...   199   2e-49
emb|CAB89327.1| putative protein [Arabidopsis thaliana]               199   2e-49
gb|AAL36361.1| unknown protein [Arabidopsis thaliana]                 199   2e-49

>ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223542381|gb|EEF43923.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 665

 Score =  210 bits (534), Expect = 1e-52
 Identities = 89/124 (71%), Positives = 108/124 (87%)
 Frame = -2

Query: 416 ANWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKD 237
           ANW LHKPPLPI++GTHHSKAMLLVYPRG+R+++HT+NLI+VDWNNK+QGLWMQDFPWKD
Sbjct: 269 ANWILHKPPLPISFGTHHSKAMLLVYPRGMRIIVHTANLIYVDWNNKTQGLWMQDFPWKD 328

Query: 236 KTDQSRGCGFENDLIDYLNALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVCFCSPIN 57
           +  Q++GCGFENDL+DYLN LKWPEF+V LP  G+  INPSFFKKFDYS+AAV   + + 
Sbjct: 329 EKSQTKGCGFENDLVDYLNTLKWPEFTVKLPALGSFTINPSFFKKFDYSTAAVRLIASVP 388

Query: 56  N*HS 45
             H+
Sbjct: 389 GYHT 392


>ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
           gi|355497702|gb|AES78905.1| Tyrosyl-DNA
           phosphodiesterase [Medicago truncatula]
          Length = 849

 Score =  201 bits (510), Expect = 7e-50
 Identities = 89/123 (72%), Positives = 102/123 (82%)
 Frame = -2

Query: 413 NWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKDK 234
           NW LHKPPLPI++GTHHSKAM LVYPRG+RV+IHT+NLI+VDWNNKSQGLWMQDFPWKD+
Sbjct: 246 NWILHKPPLPISFGTHHSKAMFLVYPRGVRVIIHTANLIYVDWNNKSQGLWMQDFPWKDQ 305

Query: 233 TDQSRGCGFENDLIDYLNALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVCFCSPINN 54
              S+G  FENDL++YL+ALKWPEFSVNLP  GN  I PSFFKKFDYS A V   + +  
Sbjct: 306 NSPSKGSRFENDLVEYLSALKWPEFSVNLPSLGNFSICPSFFKKFDYSDAMVRLIASVPG 365

Query: 53  *HS 45
            HS
Sbjct: 366 YHS 368


>ref|NP_197021.2| tyrosyl-DNA phosphodiesterase 1 [Arabidopsis thaliana]
           gi|23297734|gb|AAN13014.1| unknown protein [Arabidopsis
           thaliana] gi|226511716|gb|ACO60340.1| tyrosyl-DNA
           phosphodiesterase I [Arabidopsis thaliana]
           gi|332004741|gb|AED92124.1| tyrosyl-DNA
           phosphodiesterase 1 [Arabidopsis thaliana]
          Length = 605

 Score =  199 bits (506), Expect = 2e-49
 Identities = 90/125 (72%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = -2

Query: 416 ANWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWK- 240
           ANW LHKP LPI++GTHHSKA+ LVYPRG+RVV+HT+NLIHVDWNNKSQGLWMQDFPWK 
Sbjct: 219 ANWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKD 278

Query: 239 DKTDQSRGCGFENDLIDYLNALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVCFCSPI 60
           D  D  +GCGFE DLIDYLN LKWPEF+ NLP  GNVKIN +FFKKFDYS A V   + +
Sbjct: 279 DDKDPPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNVKINAAFFKKFDYSDATVRLIASV 338

Query: 59  NN*HS 45
              H+
Sbjct: 339 PGYHT 343


>emb|CAB89327.1| putative protein [Arabidopsis thaliana]
          Length = 627

 Score =  199 bits (506), Expect = 2e-49
 Identities = 90/125 (72%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = -2

Query: 416 ANWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWK- 240
           ANW LHKP LPI++GTHHSKA+ LVYPRG+RVV+HT+NLIHVDWNNKSQGLWMQDFPWK 
Sbjct: 219 ANWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKD 278

Query: 239 DKTDQSRGCGFENDLIDYLNALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVCFCSPI 60
           D  D  +GCGFE DLIDYLN LKWPEF+ NLP  GNVKIN +FFKKFDYS A V   + +
Sbjct: 279 DDKDPPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNVKINAAFFKKFDYSDATVRLIASV 338

Query: 59  NN*HS 45
              H+
Sbjct: 339 PGYHT 343


>gb|AAL36361.1| unknown protein [Arabidopsis thaliana]
          Length = 605

 Score =  199 bits (506), Expect = 2e-49
 Identities = 90/125 (72%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = -2

Query: 416 ANWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWK- 240
           ANW LHKP LPI++GTHHSKA+ LVYPRG+RVV+HT+NLIHVDWNNKSQGLWMQDFPWK 
Sbjct: 219 ANWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFPWKD 278

Query: 239 DKTDQSRGCGFENDLIDYLNALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVCFCSPI 60
           D  D  +GCGFE DLIDYLN LKWPEF+ NLP  GNVKIN +FFKKFDYS A V   + +
Sbjct: 279 DDKDPPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNVKINAAFFKKFDYSDATVRLIASV 338

Query: 59  NN*HS 45
              H+
Sbjct: 339 PGYHT 343