BLASTX nr result

ID: Coptis23_contig00036043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036043
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]    46   1e-08
emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera]    48   9e-08
emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera]    48   2e-07
emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]    48   2e-07
emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]    50   3e-07

>emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
 Frame = +3

Query: 117  GTLPFRYLGLPLGASYKKISK-----------KLFNEDWVA--DKTSI*RSEIDS*VF*G 257
            G LP +YLGLPLGA +K +S             L+   +++  ++ ++ +S + S     
Sbjct: 882  GGLPXKYLGLPLGAHHKALSMWDGVEERMRRLALWKRHYLSKGERITLIKSTLVSIPI-- 939

Query: 258  TCLLLLTIPVSVAEIIERTFRDFLWGSTEVKRKYHLVK*DSMHTQ 392
              L L  +P  V + +E+  RDFLWG   ++RK HL+  + + TQ
Sbjct: 940  YQLSLFKMPKLVVKRLEKLQRDFLWGGGSLERKIHLINWEVVCTQ 984



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 373  EIVCTPKETGGRGYRNLVTMKKALLG 450
            E+VCT K+TGG G R +V + KALLG
Sbjct: 979  EVVCTQKKTGGLGIRKIVLLNKALLG 1004


>emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera]
          Length = 1033

 Score = 47.8 bits (112), Expect(2) = 9e-08
 Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
 Frame = +3

Query: 117 GTLPFRYLGLPLGASYKKISKKLFNEDWVADKTSI*RSEIDS*VF*GTCLLLL------- 275
           G+LP  YLGLPLGA YK I      E+    + S+ + +  S    G CL LL       
Sbjct: 261 GSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKKQYLSK---GGCLTLLKSTLSSL 317

Query: 276 --------TIPVSVAEIIERTFRDFLWGSTEVKRKYHLV 368
                    IP  V   +E+  RDFLWG   ++ K HLV
Sbjct: 318 PTYFLSLFVIPKRVCARLEKIQRDFLWGGGALENKPHLV 356



 Score = 33.1 bits (74), Expect(2) = 9e-08
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 373 EIVCTPKETGGRGYRNLVTMKKALLG 450
           ++VC  K+ GG G R+L T  KALLG
Sbjct: 359 KVVCADKKKGGLGIRSLATFNKALLG 384


>emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera]
          Length = 1404

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
 Frame = +3

Query: 117  GTLPFRYLGLPLGASYKKISK------------KLFNEDWVA--DKTSI*RSEIDS*VF* 254
            G+LP  YLGLPLG   +  S              L+   +++   + ++ +S + S    
Sbjct: 1113 GSLPSHYLGLPLGVPNRATSMWDGVEERIRRRLALWKRQYISKGGRITLIKSTLTSLPI- 1171

Query: 255  GTCLLLLTIPVSVAEIIERTFRDFLWGSTEVKRKYHLVK*DSMHTQ 392
               L +  +P SVA+ +E+T RDFLWG   ++ K HLVK D++ T+
Sbjct: 1172 -YQLSIFRMPKSVAKRVEKTQRDFLWGGGNLEGKVHLVKWDAVCTE 1216



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 373  EIVCTPKETGGRGYRNLVTMKKALLG 450
            + VCT K  GG G R + T+ +ALLG
Sbjct: 1211 DAVCTEKHKGGLGLRRIATLNRALLG 1236


>emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]
          Length = 1856

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
 Frame = +3

Query: 117  GTLPFRYLGLPLGASYKKISK------------KLFNEDWVA--DKTSI*RSEIDS*VF* 254
            G+LP  YLGLPLG   +  S              L+   +++   + ++ +S + S    
Sbjct: 1613 GSLPSHYLGLPLGVPNRATSMWDGVEERIRRRLALWKRQYISXGGRITLIKSTLASLPI- 1671

Query: 255  GTCLLLLTIPVSVAEIIERTFRDFLWGSTEVKRKYHLVK*DSMHTQ 392
               L +  +P SVA+ +E+T RDFLWG   ++ K HLVK D++ T+
Sbjct: 1672 -YQLSIFRMPKSVAKRVEKTQRDFLWGGGNLEGKVHLVKWDAVCTE 1716



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 373  EIVCTPKETGGRGYRNLVTMKKALLG 450
            + VCT K  GG G R + T+ +ALLG
Sbjct: 1711 DAVCTEKHKGGLGLRRIATLNRALLG 1736


>emb|CAN78730.1| hypothetical protein VITISV_020014 [Vitis vinifera]
          Length = 342

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
 Frame = +3

Query: 117 GTLPFRYLGLPLGASYKKISK------------KLFNEDWVA--DKTSI*RSEIDS*VF* 254
           G LP  YLGLPLGA++K IS              L+   +++   + ++ +S + S    
Sbjct: 10  GALPSVYLGLPLGANHKAISMWDGVEERMRRRLALWKRQYISKGGRITLIKSTLASIPI- 68

Query: 255 GTCLLLLTIPVSVAEIIERTFRDFLWGSTEVKRKYHLVK*DSMHTQ 392
              L L  +P SVA+ +E+  RDFLWG   ++RK HL+  + + TQ
Sbjct: 69  -YQLSLFRMPKSVAKRLEKLQRDFLWGGGRMERKIHLINWEVVCTQ 113



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 373 EIVCTPKETGGRGYRNLVTMKKALL 447
           E+VCT K  GG G R +  + KALL
Sbjct: 108 EVVCTQKVKGGLGIRKIDLLNKALL 132


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