BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036025
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              117   7e-25
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]               113   1e-23
emb|CCH50966.1| T4.5 [Malus x robusta]                                113   2e-23
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   108   3e-22
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]   108   4e-22

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = -1

Query: 296  HPIEALHSSLANIPITPTCYTQAVKDENWRKAIIKEFNALQRNGTWI*VPYSSEYNLIGS 117
            +P  A+HS+L  +P+ PTCYTQA K   WR+A+  EF ALQ+ GTW  VP SS  N++ +
Sbjct: 858  NPKYAMHSTLLALPLEPTCYTQAAKYPEWREAMDHEFKALQQAGTWFLVPPSSLMNILPN 917

Query: 116  KWVFRLKLKVDGSLDKHKARLVAKGFHQQPGVDFTGIF 3
            KWVFR+K + DGS++++KARLVA GFHQQ G+D+T  F
Sbjct: 918  KWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETF 955


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/99 (51%), Positives = 72/99 (72%)
 Frame = -1

Query: 299 KHPIEALHSSLANIPITPTCYTQAVKDENWRKAIIKEFNALQRNGTWI*VPYSSEYNLIG 120
           K P     ++  +  + P+C+++A+KD +WR A+ +E+NAL +NGTW  VP S   N+IG
Sbjct: 619 KKPFSMSTTTPTSAIVEPSCHSRAIKDVHWRHAMSEEYNALIQNGTWELVPLSPSQNIIG 678

Query: 119 SKWVFRLKLKVDGSLDKHKARLVAKGFHQQPGVDFTGIF 3
            KWVF+ KLK DGSLD++KARLVAKG+HQ+PG+DF   F
Sbjct: 679 CKWVFKRKLKSDGSLDRYKARLVAKGYHQRPGLDFADTF 717


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/103 (51%), Positives = 72/103 (69%)
 Frame = -1

Query: 311  FFATKHPIEALHSSLANIPITPTCYTQAVKDENWRKAIIKEFNALQRNGTWI*VPYSSEY 132
            F ATKH + +   SL  +P TP+ + QA K  +W +A+  EF ALQ  GTW  VP  S Y
Sbjct: 1128 FTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQSTGTWELVPNHSTY 1187

Query: 131  NLIGSKWVFRLKLKVDGSLDKHKARLVAKGFHQQPGVDFTGIF 3
            N++G KWVF++K K DG+++++KARLVAKGFHQQ G+DF+  F
Sbjct: 1188 NIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETF 1230


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = -1

Query: 251  TPTCYTQAVKDENWRKAIIKEFNALQRNGTWI*VPYSSEYNLIGSKWVFRLKLKVDGSLD 72
            TPT  +QA+KD+NWR+A+  E++AL RNGTW  VP     NL+G KW+FR+K   DGS+D
Sbjct: 845  TPTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSID 904

Query: 71   KHKARLVAKGFHQQPGVDFTGIF 3
            ++KARLVAKGFHQ+PGVD+   F
Sbjct: 905  RYKARLVAKGFHQRPGVDYHETF 927


>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/100 (51%), Positives = 67/100 (67%)
 Frame = -1

Query: 311 FFATKHPIEALHSSLANIPITPTCYTQAVKDENWRKAIIKEFNALQRNGTWI*VPYSSEY 132
           + A KHP+     S     I P C  Q + D NW+ A+ +E+ AL RN TW  VPY  +Y
Sbjct: 261 YAALKHPLSFSLGS-----IEPMCVKQVLADPNWKIAMKEEYKALMRNDTWDLVPYQPQY 315

Query: 131 NLIGSKWVFRLKLKVDGSLDKHKARLVAKGFHQQPGVDFT 12
           N++G+KWVF+LK  +D +L+KHKA LVAKGFHQ PGVDF+
Sbjct: 316 NVVGNKWVFKLKFHLDDTLNKHKASLVAKGFHQTPGVDFS 355