BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036020
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF28188.1| 50S ribosomal protein L2 (chloroplast) [Phoenix d...   232   3e-59
ref|YP_740692.1| ribosomal protein L2 [Nandina domestica] gi|114...   228   4e-58
gb|AFG25665.1| ribosomal protein L2, partial [Phormium tenax]         225   3e-57
gb|AFG25663.1| ribosomal protein L2, partial [Nolina atopocarpa]      225   3e-57
gb|AFG25639.1| ribosomal protein L2, partial [Asparagus officina...   225   3e-57

>gb|ADF28188.1| 50S ribosomal protein L2 (chloroplast) [Phoenix dactylifera]
          Length = 277

 Score =  232 bits (591), Expect = 3e-59
 Identities = 110/114 (96%), Positives = 112/114 (98%)
 Frame = -1

Query: 343 ILNNTAIHLYKTSTPSTRNGSVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGH 164
           +LNNTAIHLYKTSTPSTRNG+V SQVKSNPRNNLIYGQ RCGKGRNARGIITARHRGGGH
Sbjct: 1   MLNNTAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGH 60

Query: 163 KRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 2
           KRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Sbjct: 61  KRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 114


>ref|YP_740692.1| ribosomal protein L2 [Nandina domestica]
           gi|114330034|ref|YP_740715.1| ribosomal protein L2
           [Nandina domestica] gi|122165904|sp|Q09FP6.1|RK2_NANDO
           RecName: Full=50S ribosomal protein L2, chloroplastic
           gi|114054513|gb|ABI49906.1| ribosomal protein L2
           [Nandina domestica] gi|114054536|gb|ABI49929.1|
           ribosomal protein L2 [Nandina domestica]
          Length = 274

 Score =  228 bits (581), Expect = 4e-58
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -1

Query: 328 AIHLYKTSTPSTRNGSVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLYR 149
           AIHLYKTSTPSTRNG+VGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLYR
Sbjct: 2   AIHLYKTSTPSTRNGTVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLYR 61

Query: 148 KIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 2
           KIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Sbjct: 62  KIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 110


>gb|AFG25665.1| ribosomal protein L2, partial [Phormium tenax]
          Length = 274

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/110 (97%), Positives = 108/110 (98%)
 Frame = -1

Query: 331 TAIHLYKTSTPSTRNGSVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLY 152
           TAIHLYKTSTPSTRNG+V SQVKSNPRNNLIYGQ RCGKGRNARGIITARHRGGGHKRLY
Sbjct: 1   TAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 151 RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 2
           RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Sbjct: 61  RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 110


>gb|AFG25663.1| ribosomal protein L2, partial [Nolina atopocarpa]
          Length = 274

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/110 (97%), Positives = 108/110 (98%)
 Frame = -1

Query: 331 TAIHLYKTSTPSTRNGSVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLY 152
           TAIHLYKTSTPSTRNG+V SQVKSNPRNNLIYGQ RCGKGRNARGIITARHRGGGHKRLY
Sbjct: 1   TAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 151 RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 2
           RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Sbjct: 61  RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 110


>gb|AFG25639.1| ribosomal protein L2, partial [Asparagus officinalis]
           gi|381353620|gb|AFG25643.1| ribosomal protein L2,
           partial [Chamaedorea seifrizii]
           gi|381353622|gb|AFG25644.1| ribosomal protein L2,
           partial [Chlorophytum rhizopendulum]
           gi|381353638|gb|AFG25652.1| ribosomal protein L2,
           partial [Hesperaloe parviflora]
           gi|381353640|gb|AFG25653.1| ribosomal protein L2,
           partial [Hosta ventricosa] gi|381353673|gb|AFG25669.1|
           ribosomal protein L2, partial [Ravenea hildebrandtii]
          Length = 274

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/110 (97%), Positives = 108/110 (98%)
 Frame = -1

Query: 331 TAIHLYKTSTPSTRNGSVGSQVKSNPRNNLIYGQRRCGKGRNARGIITARHRGGGHKRLY 152
           TAIHLYKTSTPSTRNG+V SQVKSNPRNNLIYGQ RCGKGRNARGIITARHRGGGHKRLY
Sbjct: 1   TAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 151 RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 2
           RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Sbjct: 61  RKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII 110