BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036007
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   177   5e-42
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   175   3e-41
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   163   1e-37
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   152   2e-34

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  177 bits (449), Expect = 5e-42
 Identities = 94/181 (51%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1274 DVVYHNGMFYAVSKKGGVAVFYLGGNKPVVSFISPPVKCDGDILYLVVSDTGGIFLVTRY 1095
            DV++H G+FYAV+K G +AV  + G+ P VS I  P +  GD+ YLV S    + LVTRY
Sbjct: 211  DVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQYLVESGEE-LLLVTRY 269

Query: 1094 LNFVSDVEPD---LIYSTVGFDVFELAASDMNWVPVKSLGDRMFFLGGNSSLCLLASDFP 924
            L+   DVEPD   LIY T  F V  L      W  V SLGDR  FLG N SL L + DFP
Sbjct: 270  LDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFP 329

Query: 923  GCNGNCIYFTSDYTEANDGGAWGDHDVGVFMLEDGSLETFPCWSSHSRSILPPHIWVTPS 744
            GC GNCIY+T DY+E N  G  G+ D+G+F LEDGS+E  PC  SH R   PP +WVTP+
Sbjct: 330  GCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPC--SHFRIRWPPPLWVTPN 387

Query: 743  P 741
            P
Sbjct: 388  P 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  175 bits (443), Expect = 3e-41
 Identities = 93/181 (51%), Positives = 114/181 (62%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1274 DVVYHNGMFYAVSKKGGVAVFYLGGNKPVVSFISPPVKCDGDILYLVVSDTGGIFLVTRY 1095
            DV++H G+FYAV+K G +AV  + G+ P VS I  P +  GD+ YLV S    + LVTRY
Sbjct: 211  DVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFGGDLQYLVESGEE-LLLVTRY 269

Query: 1094 LNFVSDVEPD---LIYSTVGFDVFELAASDMNWVPVKSLGDRMFFLGGNSSLCLLASDFP 924
            L+   DVE D   LIY T  F V  L +    W  V SLGDR  FLG N SL L + DFP
Sbjct: 270  LDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFP 329

Query: 923  GCNGNCIYFTSDYTEANDGGAWGDHDVGVFMLEDGSLETFPCWSSHSRSILPPHIWVTPS 744
            GC GNCIY+T DY+E N  G  G+ D+G+F LEDGS+E  PC  SH R   PP +WVTP+
Sbjct: 330  GCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPC--SHFRIRWPPPLWVTPN 387

Query: 743  P 741
            P
Sbjct: 388  P 388


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  172 bits (437), Expect = 1e-40
 Identities = 91/181 (50%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
 Frame = -3

Query: 1274 DVVYHNGMFYAVSKKGGVAVFYLGGNKPVVSFISPPVKCDGDILYLVVSDTGGIFLVTRY 1095
            DV+Y NG+FYAV+K G + V  + GN P VSFI  P +  GD+ YLV S   G+ LVTRY
Sbjct: 215  DVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDMQYLV-SSGDGLLLVTRY 273

Query: 1094 LNFVSDVEPDL-IYSTVGFDVFELAASDMNWVPVKSLGDRMFFLGGNSSLCLLASDFPGC 918
            L+   DVE D+ IY T  F+VF+L  +   W  V SLGD M F+G NSSL L AS   GC
Sbjct: 274  LDL--DVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGC 331

Query: 917  NGNCIYFTSDYTEANDGGAWGDHDVGVFMLEDGSLETFPCW--SSHSRSILPPHIWVTPS 744
             G+CIY+T DY+  N  G  G+HD+G+F L DGS+E  PC+  +S+SR   PP +W++P+
Sbjct: 332  MGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391

Query: 743  P 741
            P
Sbjct: 392  P 392


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  163 bits (412), Expect = 1e-37
 Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 7/185 (3%)
 Frame = -3

Query: 1274 DVVYHNGMFYAVSKKGGVAVFYLGGNKPVVSFISPPVKCDGDILYLVVSDTGGIFLVTRY 1095
            DV++ NGMFYAV+K G + +  +  + P VSF+  P +  GD+ YLV S    + LVTRY
Sbjct: 214  DVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSGDE-LLLVTRY 272

Query: 1094 LNFV-----SDVEPDLIYSTVGFDVFELAASDMNWVPVKSLGDRMFFLGGNSSLCLLASD 930
            L+        D+EP LIY T+ F+VF L  +   W+ + +LGD+  F+G NSSL L A+D
Sbjct: 273  LDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATD 332

Query: 929  FPGCNGNCIYFTSDYTEANDGGAWGDHDVGVFMLEDGSLETFPCWSSHSRSIL--PPHIW 756
            F GC GNCIY+T DY +AN  G +GDHD+G+F L D ++E  PC+  +  S L   P +W
Sbjct: 333  FSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLW 392

Query: 755  VTPSP 741
            V+P+P
Sbjct: 393  VSPNP 397


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  152 bits (383), Expect = 2e-34
 Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 10/188 (5%)
 Frame = -3

Query: 1274 DVVYHNGMFYAVSKKGGVAVFYLGGN--KPVVSFI--SPPVKCDGDILYLVVSDTGGIFL 1107
            DVV +NG+F+AVSK G +AV   G     P VS I  + P    GDI Y V S  G + L
Sbjct: 206  DVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRVSIIQTTTPFGFAGDIHYAVFS-AGDMLL 264

Query: 1106 VTRYLNF-VSD---VEPDLIYSTVGFDVFELAASDMNWVPVKSLGDRMFFLGGNSSLCLL 939
            + R L+   SD    E DL+Y TVGF+VF++    + W  V++LG+R+ F+GGNSSL   
Sbjct: 265  LIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFC 324

Query: 938  ASDFPGCNGNCIYFTSDYTEANDGGAWGDHDVGVFMLEDGSLETFPCWSSHSRSIL--PP 765
            ASDF GC+ +CIYFT DY+E+ND  A G HD+GVF L D S+E  PC++ +S S L  P 
Sbjct: 325  ASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPL 384

Query: 764  HIWVTPSP 741
             IWV+P+P
Sbjct: 385  PIWVSPNP 392