BLASTX nr result

ID: Coptis23_contig00036000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036000
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]   200   9e-50
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]   199   2e-49
emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]   194   5e-48
emb|CAN60812.1| hypothetical protein VITISV_038721 [Vitis vinifera]   186   2e-45
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      181   4e-44

>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
          Length = 324

 Score =  200 bits (509), Expect = 9e-50
 Identities = 95/125 (76%), Positives = 108/125 (86%)
 Frame = -2

Query: 424 VAWQSKKQNSISLSTAEAEYIAAGSCCAQLLWMKQMLHDYGIQQETMTIFCDNTSAINIT 245
           VAW SKKQNS+SLSTAEAEYIAAGSCC+QLLW+KQML DYGI Q TM +FCDNTSAINI+
Sbjct: 200 VAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWIKQMLRDYGIDQGTMVVFCDNTSAINIS 259

Query: 244 KNPVQHSRTKHIDICHHFIRELVEHKEISVEYVKTEKQLADLFTKPLDSLRYEFLRTSIG 65
           KNPV HSRTKHIDI HHFIR+LVE K +S+EYV TE Q+AD+ TKPLD  R+E LR SIG
Sbjct: 260 KNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLRKSIG 319

Query: 64  LCVID 50
           LC ++
Sbjct: 320 LCTVN 324


>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
          Length = 956

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/125 (75%), Positives = 108/125 (86%)
 Frame = -2

Query: 424  VAWQSKKQNSISLSTAEAEYIAAGSCCAQLLWMKQMLHDYGIQQETMTIFCDNTSAINIT 245
            VAW SKKQNS+SLSTAEAEYIAAGSCC+QLLW+KQML +YGI Q TM +FCDNTSAINI+
Sbjct: 832  VAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWIKQMLRBYGIDQGTMVVFCDNTSAINIS 891

Query: 244  KNPVQHSRTKHIDICHHFIRELVEHKEISVEYVKTEKQLADLFTKPLDSLRYEFLRTSIG 65
            KNPV HSRTKHIDI HHFIR+LVE K +S+EYV TE Q+AD+ TKPLD  R+E LR SIG
Sbjct: 892  KNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLRKSIG 951

Query: 64   LCVID 50
            LC ++
Sbjct: 952  LCXVN 956


>emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]
          Length = 324

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/125 (74%), Positives = 105/125 (84%)
 Frame = -2

Query: 424 VAWQSKKQNSISLSTAEAEYIAAGSCCAQLLWMKQMLHDYGIQQETMTIFCDNTSAINIT 245
           VAW SKKQNSISLS AEAEYIA GSCC+QLLW+KQML DYGI Q TM +FCDNTSAINI+
Sbjct: 200 VAWMSKKQNSISLSIAEAEYIAIGSCCSQLLWIKQMLRDYGIDQGTMVVFCDNTSAINIS 259

Query: 244 KNPVQHSRTKHIDICHHFIRELVEHKEISVEYVKTEKQLADLFTKPLDSLRYEFLRTSIG 65
           KNPV H RTKHIDI HHFIR+LVE K +S+EYV TE Q+AD+ TKPLD  R+E LR SIG
Sbjct: 260 KNPVLHXRTKHIDIRHHFIRDLVEDKVVSLEYVPTEGQIADILTKPLDVSRFESLRKSIG 319

Query: 64  LCVID 50
           LC ++
Sbjct: 320 LCTVN 324


>emb|CAN60812.1| hypothetical protein VITISV_038721 [Vitis vinifera]
          Length = 312

 Score =  186 bits (472), Expect = 2e-45
 Identities = 88/124 (70%), Positives = 102/124 (82%)
 Frame = -2

Query: 424 VAWQSKKQNSISLSTAEAEYIAAGSCCAQLLWMKQMLHDYGIQQETMTIFCDNTSAINIT 245
           VAW  KKQN +SLS  EAEYIAAGSCC+QLLW+KQML DYGI Q TM +FC NT+AINI+
Sbjct: 188 VAWMIKKQNFVSLSIVEAEYIAAGSCCSQLLWIKQMLRDYGIDQGTMVVFCTNTNAINIS 247

Query: 244 KNPVQHSRTKHIDICHHFIRELVEHKEISVEYVKTEKQLADLFTKPLDSLRYEFLRTSIG 65
           KNPV HSRTKHIDI HHFI +LVE K +S+EYV TE Q+AD+ TKPLD  R+E LR SIG
Sbjct: 248 KNPVLHSRTKHIDIRHHFICDLVEDKVVSLEYVPTETQIADILTKPLDVSRFESLRKSIG 307

Query: 64  LCVI 53
           LC++
Sbjct: 308 LCIV 311


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  181 bits (460), Expect = 4e-44
 Identities = 81/125 (64%), Positives = 109/125 (87%)
 Frame = -2

Query: 424  VAWQSKKQNSISLSTAEAEYIAAGSCCAQLLWMKQMLHDYGIQQETMTIFCDNTSAINIT 245
            ++W SKKQN +SLSTAEAEYIAAGS C+QL+WMKQML +Y ++Q+ MT++CDN SAINI+
Sbjct: 1451 ISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINIS 1510

Query: 244  KNPVQHSRTKHIDICHHFIRELVEHKEISVEYVKTEKQLADLFTKPLDSLRYEFLRTSIG 65
            KNPVQHSRTKHIDI HH+IRELV+ K I++E+V TE+Q+AD+FTK LD+ ++E LR  +G
Sbjct: 1511 KNPVQHSRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLG 1570

Query: 64   LCVID 50
            +C+++
Sbjct: 1571 ICLLE 1575


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