BLASTX nr result

ID: Coptis23_contig00035994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035994
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    42   3e-08
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    47   6e-08
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               42   1e-07
emb|CAN83409.1| hypothetical protein VITISV_034065 [Vitis vinifera]    41   2e-07
emb|CAN60807.1| hypothetical protein VITISV_044449 [Vitis vinifera]    42   3e-07

>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 42.0 bits (97), Expect(2) = 3e-08
 Identities = 17/49 (34%), Positives = 33/49 (67%)
 Frame = +3

Query: 9   HTIYIGSDSVLLGNGDQLPITYTDNMTLPIGFSQFRLNNVYVIPSMLKN 155
           H+ Y G+D V++G+G  LPIT++ ++TL     +F++ +   +P++ KN
Sbjct: 317 HSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKN 365



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +2

Query: 128 LCHSFYAKKLLSIAQFCHDNNVLCAFDSHHFYVFAKSNGCLLFQGQCKDGLYKL 289
           LC     K L+S+  F   NNV+  F   +F V  +  G +L QG C++G+Y +
Sbjct: 357 LCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPM 410


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 47.0 bits (110), Expect(2) = 6e-08
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +3

Query: 9   HTIYIGSDSVLLGNGDQLPITYTDNMTLPIGFSQFRLNNVYVIPSMLKN 155
           H  Y GSD +++ +G  LPIT+T +++L    +QF L NV  +P M KN
Sbjct: 253 HAPYNGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNVLCVPGMKKN 301



 Score = 34.7 bits (78), Expect(2) = 6e-08
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +2

Query: 128 LCHSFYAKKLLSIAQFCHDNNVLCAFDSHHFYVFAKSNGCLLFQGQCKDGLYKLL 292
           LC     K L+SI++    NNV   F    F V     G  L +G+ KDG+Y+ L
Sbjct: 293 LCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLKGKTKDGVYEWL 347


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 42.0 bits (97), Expect(2) = 1e-07
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 155 LLSIAQFCHDNNVLCAFDSHHFYVFAKSNGCLLFQGQCKDGLYK 286
           L+S+++FC DNN +  F    F+V  K     L QGQ + GLYK
Sbjct: 515 LISVSKFCTDNNTIMEFHPSSFFVKDKDTKVTLLQGQLERGLYK 558



 Score = 38.5 bits (88), Expect(2) = 1e-07
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +3

Query: 12  TIYIGSDSVLLGNGDQLPITYTDNMTLPIGFSQFRLNNVYVIPSMLKNYYLLLSF 176
           T Y G+DSV++ NG  LPIT   +  L      F L+NV  +P +  N   +  F
Sbjct: 467 TPYNGTDSVMVDNGKSLPITQVGHSFLHTSAKPFVLHNVLYVPQLTSNLISVSKF 521


>emb|CAN83409.1| hypothetical protein VITISV_034065 [Vitis vinifera]
          Length = 403

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +2

Query: 128 LCHSFYAKKLLSIAQFCHDNNVLCAFDSHHFYVFAKSNGCLLFQGQCKDGLYKL 289
           LC     K L+S+  F   NNV+  F   +F V  +  G +L QG C++G+Y L
Sbjct: 308 LCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPL 361



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 16/49 (32%), Positives = 32/49 (65%)
 Frame = +3

Query: 9   HTIYIGSDSVLLGNGDQLPITYTDNMTLPIGFSQFRLNNVYVIPSMLKN 155
           H+ Y G++ V++G+G  LPIT+  ++TL     +F++ +   +P++ KN
Sbjct: 268 HSEYDGTNEVVIGDGSGLPITHFGSLTLSFPNRKFQVEDTLCVPTINKN 316


>emb|CAN60807.1| hypothetical protein VITISV_044449 [Vitis vinifera]
          Length = 439

 Score = 41.6 bits (96), Expect(2) = 3e-07
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +2

Query: 143 YAKKLLSIAQFCHDNNVLCAFDSHHFYVFAKSNGCLLFQGQCKDGLYKL 289
           ++  L+S+ + C+DN V   F + HF V  + +  +L QGQ  +GLYK+
Sbjct: 81  FSNNLISVTKLCYDNKVFVEFYATHFLVKDRVSKRVLLQGQLDNGLYKV 129



 Score = 37.7 bits (86), Expect(2) = 3e-07
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 12  TIYIGSDSVLLGNGDQLPITYTDNMTLPIGFSQFRLNNVYVIPSMLKN 155
           T + GSD V +GNG QL I++     LP  +S   L+ VY  P    N
Sbjct: 37  TSFSGSDQVTVGNGKQLHISHLGTAKLPSSYSPLVLHQVYHTPKFSNN 84


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