BLASTX nr result

ID: Coptis23_contig00035988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035988
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab...    65   6e-09
ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805...    65   7e-09
ref|XP_003532977.1| PREDICTED: uncharacterized protein LOC100791...    64   1e-08
ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cuc...    62   4e-08
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    62   5e-08

>ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp.
           lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein
           ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata]
          Length = 2186

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
 Frame = -1

Query: 333 MASVSEASIISRLEKSDYRN-LRQDFLQYLKPLSNLVTFNYDHDSTXXXXXXNVKNQKTI 157
           MAS  +  ++S +E SD  + +   F  YLKP S L T     D              TI
Sbjct: 1   MASTDDLRLLSLIESSDAGDDIFSSFSDYLKPFSTLSTSRKKQDRAT-----------TI 49

Query: 156 RQLANKFLQFLNRALKYLPIRLN--ELQKSDRETALDLFCMYKVCLACSKFLS 4
           R LA +FL FLN+++  LP RL+  +  K  RE+ALDLF  Y++CL C + +S
Sbjct: 50  RALAKQFLPFLNKSISLLPKRLSVAKSDKEARESALDLFRAYELCLDCLELVS 102


>ref|XP_003547059.1| PREDICTED: uncharacterized protein LOC100805306 [Glycine max]
          Length = 2185

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -1

Query: 333 MASVSEASIISRLEKSDYRNLRQDFLQYLKPLSNLVTFNYDHDSTXXXXXXNVKNQKTIR 154
           MAS SE+S+IS+L+ SD   +      YL+PLS+L      +            +Q  IR
Sbjct: 1   MASPSESSLISKLQSSDSPGIHALVSDYLRPLSDLKPTKKSNP-----------DQTLIR 49

Query: 153 QLANKFLQFLNRALKYLPIRLNELQKSDRETA-LDLFCMYKVCLAC 19
            LA +FL FLN +L  LP RL E+ KS+   + L+L  +Y++CL C
Sbjct: 50  SLAKRFLSFLNASLSILPKRLPEVSKSNNAVSLLELLRVYRLCLDC 95


>ref|XP_003532977.1| PREDICTED: uncharacterized protein LOC100791010 [Glycine max]
          Length = 2142

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -1

Query: 333 MASVSEASIISRLEKSDYRNLRQDFLQYLKPLSNLVTFNYDHDSTXXXXXXNVKNQKTIR 154
           MAS SE+S+IS+L+ SD   +      YL+PLS+L      +            +Q  IR
Sbjct: 1   MASPSESSLISKLQSSDSPGIHALVSDYLRPLSDLKPTKKPNP-----------DQTLIR 49

Query: 153 QLANKFLQFLNRALKYLPIRLNELQKSDRETA---LDLFCMYKVCLAC 19
            LA +FL FLN +L  LP RL E+ KS+   A   L+L  +Y++CL C
Sbjct: 50  SLAKRFLSFLNASLSLLPKRLPEVSKSNDSDAVFLLELLRVYRLCLDC 97


>ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cucumis sativus]
          Length = 2165

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = -1

Query: 333 MASVSEASIISRLEKSDYRNLRQDFLQYLKPLSNLVTFNYDHDSTXXXXXXNVKNQKTIR 154
           MAS SE+++IS LE +D + +      +L P S++                   +  TIR
Sbjct: 1   MASPSESALISLLETADSKGIFSLVSDFLYPFSDI-----KKPKKCKKSVKPTDDSSTIR 55

Query: 153 QLANKFLQFLNRALKYLPIRLNELQK--SDRETALDLFCMYKVCLACSKFLS 4
            LA +FL FLNRAL  LP RL +  K  +  + AL+LF +YK+CL C + L+
Sbjct: 56  SLAKEFLSFLNRALSILPKRLTDPSKLGNHLDFALELFEIYKLCLGCLECLT 107


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
 Frame = -1

Query: 333 MASVSEASIISRLEKSDYRNLRQDFLQYLKPLSNLVTFNYDHDST----XXXXXXNVKNQ 166
           M S  E+S+IS+L+ SD+ N+   FL +L+P S  +       +T          +  + 
Sbjct: 1   MDSSMESSLISKLQSSDFANIHHHFLSHLRPFSPFLNSKPTTTTTTTRKPNRSSSSSSSS 60

Query: 165 KTIRQLANKFLQFLNRALKYLPIRLNELQKSDRETA--LDLFCMYKVCLACSKFLS 4
            +IR LA +FL FLNR L  LP ++  +  SD ET    +LF  Y++CL C + +S
Sbjct: 61  SSIRSLAKQFLPFLNRVLSILP-KILSVSSSDLETTSLRELFDTYRLCLDCLECVS 115


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