BLASTX nr result

ID: Coptis23_contig00035987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035987
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250...   135   3e-30
gb|ABK95718.1| unknown [Populus trichocarpa]                          131   5e-29
ref|XP_004133799.1| PREDICTED: uncharacterized protein LOC101206...   129   3e-28
ref|XP_002533330.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
gb|AFK35215.1| unknown [Lotus japonicus]                              128   5e-28

>ref|XP_002262754.1| PREDICTED: uncharacterized protein LOC100250645 [Vitis vinifera]
           gi|296088978|emb|CBI38681.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  135 bits (340), Expect = 3e-30
 Identities = 71/123 (57%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 6   MAVPLGLLNVRTFPQKPFLVLSKLPNLSSPTKINATKHSKNPLKPLQ---HEVIQHLTPL 176
           MA  L LL +    QK     SKL N  +P +   ++HS +P + L    H +     PL
Sbjct: 1   MATTLSLLRLSIVSQKSHQTHSKLVNRPNPVRSVISQHSLDPQRLLSETTHRLKSAALPL 60

Query: 177 TAFTLPFFLDPQDALAVDGELGLLEGRSFALIHPLVMGSLFFYTLYAGYLGWQWRRVRTI 356
           TA TLPF LD +DALAV GE G+LEGR+ ALIHP+VMGSLFFYTL+AGYLGWQWRRVRTI
Sbjct: 61  TALTLPFLLDSKDALAVGGEFGILEGRTLALIHPIVMGSLFFYTLWAGYLGWQWRRVRTI 120

Query: 357 QNE 365
           QNE
Sbjct: 121 QNE 123


>gb|ABK95718.1| unknown [Populus trichocarpa]
          Length = 274

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/127 (56%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
 Frame = +3

Query: 6   MAVPLGLLNVRTFPQK---PFLVLSKLPNLSSPTKINATKHSKNPLKPLQHEVIQHLTPL 176
           MA  LGLLN     QK   PF + SK+P LS+ +K++  K   +  + L  E IQHL+  
Sbjct: 1   MATTLGLLNFPILAQKNNTPF-IHSKMPLLSNSSKLDVCKKDSHSPRKLFTETIQHLSSA 59

Query: 177 T----AFTLPFFLDPQDALAVDGELGLLEGRSFALIHPLVMGSLFFYTLYAGYLGWQWRR 344
           +    +  LPF LD +DALAV GE G+LEGRSFALIHP+VMG L FYTL+AGYLGWQWRR
Sbjct: 60  SLSPASLALPFLLDTKDALAVGGEFGILEGRSFALIHPIVMGGLLFYTLWAGYLGWQWRR 119

Query: 345 VRTIQNE 365
           VRT QNE
Sbjct: 120 VRTTQNE 126


>ref|XP_004133799.1| PREDICTED: uncharacterized protein LOC101206421 [Cucumis sativus]
           gi|449477966|ref|XP_004155178.1| PREDICTED:
           uncharacterized LOC101206421 [Cucumis sativus]
          Length = 268

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/117 (59%), Positives = 83/117 (70%), Gaps = 4/117 (3%)
 Frame = +3

Query: 27  LNVRTFPQKPFLVLSKLPNLSSPTKINATKHSKNPLKPLQHEVIQHLTP----LTAFTLP 194
           L++   P K  +  SKLP  S PT +  +++ K     L  + +Q+L P    LTA TLP
Sbjct: 5   LSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCS-NNLFIQTVQNLKPYTIPLTALTLP 63

Query: 195 FFLDPQDALAVDGELGLLEGRSFALIHPLVMGSLFFYTLYAGYLGWQWRRVRTIQNE 365
           FFL PQDALAV GE G+LEGRSFALIHPLVMG LF YTL+AGYLGWQWRRVRT+QNE
Sbjct: 64  FFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120


>ref|XP_002533330.1| conserved hypothetical protein [Ricinus communis]
           gi|223526835|gb|EEF29051.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = +3

Query: 6   MAVPLGLLNVRTFPQKPFLVLSKLPNLSSPTKINATK-HSKNPLKPLQHEVIQHLT-PLT 179
           MA  L LL      +K   + SK P+L  P+K++ +K  S   L    H++I   + P+T
Sbjct: 1   MATTLTLLRSPVLARKLPYIHSKFPSLPKPSKLDLSKKESSKLLNENIHQLISSASLPIT 60

Query: 180 AFTLPFFLDPQDALAVDGELGLLEGRSFALIHPLVMGSLFFYTLYAGYLGWQWRRVRTIQ 359
           AF+LP FLD +DA AV GE G+LEG++FALIHP VMG LFFYTL+AGYLGWQWRRVRTIQ
Sbjct: 61  AFSLPLFLDAKDAFAVGGEFGILEGKTFALIHPAVMGLLFFYTLWAGYLGWQWRRVRTIQ 120

Query: 360 NE 365
           NE
Sbjct: 121 NE 122


>gb|AFK35215.1| unknown [Lotus japonicus]
          Length = 273

 Score =  128 bits (321), Expect = 5e-28
 Identities = 71/127 (55%), Positives = 86/127 (67%), Gaps = 7/127 (5%)
 Frame = +3

Query: 6   MAVPLGLLNVRTFPQKPFLVLSKL---PNLSSPTKINATKHSKNPLKPLQHE---VIQHL 167
           MA  L LL +   P KP    SKL   P +S+  K++  K   NP K L      +++H 
Sbjct: 1   MAATLSLLKLPILPNKPRQSTSKLVPIPYISA--KLDTPKDFPNPQKLLDQNANALLKHA 58

Query: 168 T-PLTAFTLPFFLDPQDALAVDGELGLLEGRSFALIHPLVMGSLFFYTLYAGYLGWQWRR 344
           +  LTA T PF L+P+DALAV GE G+LEGR+FALIHP+V+G LFFYTLYAGYLGWQWRR
Sbjct: 59  SLSLTAVTFPFLLEPKDALAVGGEFGILEGRTFALIHPIVLGGLFFYTLYAGYLGWQWRR 118

Query: 345 VRTIQNE 365
           VRT QNE
Sbjct: 119 VRTTQNE 125


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