BLASTX nr result

ID: Coptis23_contig00035981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035981
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284723.1| PREDICTED: CASP-like protein At3g23200 isofo...   171   9e-41
ref|XP_002315710.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38
gb|AFK35149.1| unknown [Lotus japonicus]                              160   2e-37
ref|XP_003536249.1| PREDICTED: CASP-like protein At3g23200-like ...   157   1e-36
ref|XP_002529297.1| conserved hypothetical protein [Ricinus comm...   156   2e-36

>ref|XP_002284723.1| PREDICTED: CASP-like protein At3g23200 isoform 1 [Vitis vinifera]
           gi|296083617|emb|CBI23606.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  171 bits (432), Expect = 9e-41
 Identities = 85/121 (70%), Positives = 97/121 (80%), Gaps = 2/121 (1%)
 Frame = -3

Query: 361 PGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGLAWLD 182
           PGTPGT+TGL LRI QC+ AAGSIASMATT++FFS TAFCYLIASMGLQV+WSFGLA+LD
Sbjct: 5   PGTPGTWTGLILRISQCMFAAGSIASMATTSSFFSVTAFCYLIASMGLQVIWSFGLAFLD 64

Query: 181 AYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXAGLTVLFFRDLGTCI--GDCSKY 8
           AYAL KK V+HNPV+VSLFVVGDWVTA          AG+TVL++ D G C    +C KY
Sbjct: 65  AYALVKKKVLHNPVLVSLFVVGDWVTATLSLAAASASAGITVLYYSDFGDCDFGKECQKY 124

Query: 7   Q 5
           Q
Sbjct: 125 Q 125


>ref|XP_002315710.1| predicted protein [Populus trichocarpa] gi|222864750|gb|EEF01881.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  162 bits (409), Expect = 4e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
 Frame = -3

Query: 358 GTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGLAWLDA 179
           G PGT TGLALR+ QC+ AAGSIA+M TTTNFF+ T+FCYLIASMGLQ++WSFGL  LDA
Sbjct: 6   GAPGTLTGLALRLSQCVFAAGSIAAMTTTTNFFNSTSFCYLIASMGLQIIWSFGLTLLDA 65

Query: 178 YALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXAGLTVLFFRDLGTC--IGDCSKYQ 5
           YAL +K  +HN V++SLFVVGDWVTAI         AG+TVL+F DLG+C  + +C KYQ
Sbjct: 66  YALVRKRTLHNTVLLSLFVVGDWVTAILSLAAASASAGITVLYFHDLGSCGFVRECQKYQ 125


>gb|AFK35149.1| unknown [Lotus japonicus]
          Length = 152

 Score =  160 bits (404), Expect = 2e-37
 Identities = 82/121 (67%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = -3

Query: 361 PGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGLAWLD 182
           PGTPGT  GLALR+ Q + AAGSIASM TT +FF++TAFCYLIASMGLQV+WSF LA LD
Sbjct: 5   PGTPGTGLGLALRMAQFIFAAGSIASMTTTPSFFNFTAFCYLIASMGLQVIWSFMLALLD 64

Query: 181 AYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXAGLTVLFFRDLGTC-IGD-CSKY 8
           AYAL KK V+HNP++VSLFVVGDWVTAI          G+TVL+F DLG C  G+ C KY
Sbjct: 65  AYALVKKKVLHNPLLVSLFVVGDWVTAILSLAAASSSGGITVLYFHDLGHCRFGEGCRKY 124

Query: 7   Q 5
           Q
Sbjct: 125 Q 125


>ref|XP_003536249.1| PREDICTED: CASP-like protein At3g23200-like [Glycine max]
          Length = 152

 Score =  157 bits (397), Expect = 1e-36
 Identities = 82/120 (68%), Positives = 92/120 (76%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361 PGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGLAWLD 182
           PGTPGT  GLALRI Q + AAGSIASMATT +FF++TAFCYLIASMGLQV+WSF LA LD
Sbjct: 5   PGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAFCYLIASMGLQVIWSFVLALLD 64

Query: 181 AYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXAGLTVLFFRDLGTCI--GDCSKY 8
           AYAL KK V+HN V+VSLFVVGDWVTA          AG+TVL+F DLG C    +C KY
Sbjct: 65  AYALVKKKVLHNAVLVSLFVVGDWVTATLSLAAASSSAGITVLYFNDLGHCHFGEECQKY 124


>ref|XP_002529297.1| conserved hypothetical protein [Ricinus communis]
           gi|223531221|gb|EEF33066.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/120 (64%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
 Frame = -3

Query: 358 GTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGLAWLDA 179
           GTPGT T L LRI QC+ AAGSI +MATT+ FF++TAFCYLIASMGLQV+WS GLA LDA
Sbjct: 6   GTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAFCYLIASMGLQVIWSLGLALLDA 65

Query: 178 YALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXAGLTVLFFRDLGTC--IGDCSKYQ 5
           YAL +K V+HN ++VSLFVVGDWVTA          AG+TVL F D+G C  + +C KYQ
Sbjct: 66  YALIRKKVLHNSILVSLFVVGDWVTATLSLAAASASAGITVLLFHDVGHCNYLTECQKYQ 125


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