BLASTX nr result

ID: Coptis23_contig00035970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035970
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308697.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002308695.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002515448.1| chitinase, putative [Ricinus communis] gi|22...   103   2e-20
ref|XP_002324562.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002337087.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_002308697.1| predicted protein [Populus trichocarpa] gi|222854673|gb|EEE92220.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = +2

Query: 137 KGVKGAYWPSFTGFPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLNT 316
           KG+KGAYWPSF GF  SSIDTSYFTH++YAFLLPDP+T KLN+T  D++ +P FI  L T
Sbjct: 90  KGIKGAYWPSFDGFEASSIDTSYFTHIFYAFLLPDPVTFKLNVTPFDQQKIPGFIQNLRT 149

Query: 317 PNSHVKTLLSIGGGG-CDPKIFSAIFNSSSSRAIFI 421
            N  VKTLLS+GGG      IF+ +  +  +R +FI
Sbjct: 150 RNPPVKTLLSMGGGSDAIALIFANLSGAQETRKVFI 185


>ref|XP_002308695.1| predicted protein [Populus trichocarpa] gi|222854671|gb|EEE92218.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = +2

Query: 137 KGVKGAYWPSFTGFPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLNT 316
           KG+KGAYWPSF GF  SSIDTSYFTH++YAFLLPDP+T KLN+T  D++ +P FI  L T
Sbjct: 156 KGIKGAYWPSFDGFEASSIDTSYFTHIFYAFLLPDPVTFKLNVTPFDQQKIPGFIQNLRT 215

Query: 317 PNSHVKTLLSIGGGG-CDPKIFSAIFNSSSSRAIFI 421
            N  VKTLLS+GGG      IF+ +  +  +R +FI
Sbjct: 216 RNPPVKTLLSMGGGSDAIALIFANLSGAQETRKVFI 251


>ref|XP_002515448.1| chitinase, putative [Ricinus communis] gi|223545392|gb|EEF46897.1|
           chitinase, putative [Ricinus communis]
          Length = 517

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = +2

Query: 137 KGVKGAYWPSFTGFPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLNT 316
           +G+K AYWPSF+G   S+IDT+YFTH+YYAFLL DP+T KL++T  D+E +P FI+TL  
Sbjct: 172 QGIKAAYWPSFSGLDASAIDTTYFTHIYYAFLLLDPVTYKLDVTPFDQEKIPGFISTLRA 231

Query: 317 PNSHVKTLLSIGGGGCD-PKIFSAIFNSSSSRAIFI 421
            N  V  LLSIGG   +  K FS + +S  +R  FI
Sbjct: 232 RNHPVTILLSIGGADINQTKYFSIMSSSRETREGFI 267


>ref|XP_002324562.1| predicted protein [Populus trichocarpa] gi|222865996|gb|EEF03127.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = +2

Query: 143 VKGAYWPSFTG-FPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLNTP 319
           VK AYWPS+T  FP S+IDT+ FTH++YAFLLP  +T KL ++ +   +L  F  TL+  
Sbjct: 30  VKAAYWPSWTQTFPPSAIDTTLFTHVFYAFLLPSNVTFKLEVSESTASLLKNFTGTLHQK 89

Query: 320 NSHVKTLLSIGGGGCDPKIFSAIFNSSSSRAIFI 421
           N  VKTL+SIGGG  DPK+F+ + ++  SR+IFI
Sbjct: 90  NPPVKTLVSIGGGSSDPKLFARMASNKGSRSIFI 123


>ref|XP_002337087.1| predicted protein [Populus trichocarpa] gi|222837991|gb|EEE76356.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = +2

Query: 143 VKGAYWPSFTG-FPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLNTP 319
           VK AYWPS+T  FP S+IDT+ FTH++YAFLLP  +T KL ++ +   +L  F  TL+  
Sbjct: 30  VKAAYWPSWTQTFPPSAIDTTLFTHVFYAFLLPSNVTFKLEVSESTASLLKNFTGTLHQK 89

Query: 320 NSHVKTLLSIGGGGCDPKIFSAIFNSSSSRAIFI 421
           N  VKTL+SIGGG  DPK+F+ + ++  SR+IFI
Sbjct: 90  NPPVKTLVSIGGGSSDPKLFARMASNKGSRSIFI 123


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