BLASTX nr result

ID: Coptis23_contig00035964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035964
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    86   4e-15
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14

>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 376 WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
           W   G  E L++D   F F F   +     LE  P  +A R  +++ W    + +++ ++
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLA 238

Query: 199 TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEI 41
            VPVW+++ NVP E WT  GLS +AS V  P+  D  T  ++RLS+ARVCVEI
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 376  WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
            W   G  E L++D   F F F   +     LE  P  +A R  +++ W    + +++ ++
Sbjct: 972  WSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLA 1031

Query: 199  TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEI 41
             VPVW+++ NVP E WT  GLS +AS V  P+  D  T  ++RLS+ARVCVEI
Sbjct: 1032 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 1084


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = -3

Query: 376 WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
           W+  G M  L   R  F   F V+ED  MAL GGP  + G I +++ W+ E   +R+ I 
Sbjct: 118 WRPTGGMSVLDLPRQFFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDVIE 177

Query: 199 TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEIPL 35
           T PVW++++N+P   +    L  +A+ + KP+ +D  T +K+R  FARVCVE+ L
Sbjct: 178 TTPVWVRVANLPVTFYHNEILLGIAAGLGKPIKVDLTTLRKERGRFARVCVEVNL 232


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 376 WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
           W   G  E L++D   F F F   +     LE  P  +A R  +++ W    + +++ ++
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLA 238

Query: 199 TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEI 41
            VPVW+++ NVP E WT  GLS +AS V  P+  D  T  ++RLS+ARVCVEI
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEI 291


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 376 WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
           W   G  E L++D   F F F   +     LE  P  +A R  +++ W    + +++ ++
Sbjct: 153 WSSYGLSEVLSSDNGFFIFNFDFVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLA 212

Query: 199 TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEI 41
            VPVW+++ NVP E WT  GLS +AS +  P+  D  T  ++RLS+ARVCVEI
Sbjct: 213 RVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEI 265


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
 Frame = -3

Query: 376 WKLKGSME-LTTDRDLFYFTFTVDEDRKMALEGGPIFIAGRIFIIRPWNVEAERMRNKIS 200
           W   G  E L++D   F F F   +     LE  P  +A R  +++ W    + +++ ++
Sbjct: 32  WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLESAPWHMANRPLVLKRWQPNMQFLKDDLA 91

Query: 199 TVPVWIKMSNVPKELWTKNGLSFLASLVAKPMCMDEATAKKQRLSFARVCVEI 41
            VPVW+++ NVP E WT  GLS +AS +  P+  D  T  ++RLS+ RVCVEI
Sbjct: 92  RVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYVRVCVEI 144


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