BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035959
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japo...    87   2e-15
gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indi...    87   2e-15
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...    87   2e-15
gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica...    86   4e-15
gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays]    84   1e-14

>gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japonica Group]
          Length = 224

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/55 (78%), Positives = 45/55 (81%)
 Frame = -3

Query: 303 NLSAMEVNIVRPFFVRTLQAFYKHDSPQMIHQPDATTNRQPQVVNRGPRRDLRPR 139
           NLSAMEVNIVRPF VRTLQAFYKHDSPQMI Q D T +R   V +RGPRRDLR R
Sbjct: 170 NLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRPTPVTDRGPRRDLRRR 224


>gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indica Group]
          Length = 224

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/55 (78%), Positives = 45/55 (81%)
 Frame = -3

Query: 303 NLSAMEVNIVRPFFVRTLQAFYKHDSPQMIHQPDATTNRQPQVVNRGPRRDLRPR 139
           NLSAMEVNIVRPF VRTLQAFYKHDSPQMI Q D T +R   V +RGPRRDLR R
Sbjct: 170 NLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRPTPVTDRGPRRDLRRR 224


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/55 (78%), Positives = 45/55 (81%)
 Frame = -3

Query: 303 NLSAMEVNIVRPFFVRTLQAFYKHDSPQMIHQPDATTNRQPQVVNRGPRRDLRPR 139
           NLSAMEVNIVRPF VRTLQAFYKHDSPQMI Q D T +R   V +RGPRRDLR R
Sbjct: 157 NLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRPTPVTDRGPRRDLRRR 211


>gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica Group]
          Length = 276

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = -3

Query: 303 NLSAMEVNIVRPFFVRTLQAFYKHDSPQMIHQPDATTNRQPQVVNRGPRRDLR 145
           NLSAMEVNIVRPF VRTLQAFYKHDSPQMI Q D T +R   V +RGPRRDLR
Sbjct: 157 NLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRPTPVTDRGPRRDLR 209


>gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays]
          Length = 205

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/55 (76%), Positives = 44/55 (80%)
 Frame = -3

Query: 303 NLSAMEVNIVRPFFVRTLQAFYKHDSPQMIHQPDATTNRQPQVVNRGPRRDLRPR 139
           NLSAMEVNIVRPF VRTLQAFYKHDSPQMI Q D   +R   V +RGPRRDLR R
Sbjct: 151 NLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNIGSRATLVTDRGPRRDLRRR 205