BLASTX nr result

ID: Coptis23_contig00035936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035936
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|222853706|gb|EEE91253.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/113 (37%), Positives = 58/113 (51%)
 Frame = +2

Query: 95  VSRSFRLQRRSSIKLGRXXXXXXXXXXXXXXXXRFTKYERLSQSMRLPNEWNQDQLRCQK 274
           V RSFR++R SSIK GR                R  +YE LS SMR+ N+  QD     +
Sbjct: 4   VCRSFRVERGSSIKFGRSNSSLLISESISSECTRVARYENLSASMRMSND--QDIGYRSR 61

Query: 275 KKKAFFWLNRIFSRNGRQSGRTAENKGQGLRSQKEENKRKSWLSSWLPDPNHR 433
           K +A+ +++++FS   R+     E + Q     +EE K K   SSWLPDP  R
Sbjct: 62  KSRAYTFISKVFSF--RKISSDCETRQQADMVTQEEKKEKKKRSSWLPDPERR 112


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