BLASTX nr result

ID: Coptis23_contig00035928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035928
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   164   5e-39
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   164   9e-39
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]   159   2e-37
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   151   6e-35
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 144   6e-33

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  164 bits (416), Expect = 5e-39
 Identities = 74/114 (64%), Positives = 94/114 (82%)
 Frame = +1

Query: 22   PDFAQLFEITCDACKYGIGAVLSQNGKPVAFYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 201
            PDF ++FE+ CDA   GIGAVLSQ G PVAF+SEKL GAK  YSTYDLE+YAVVQA+RHW
Sbjct: 912  PDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHW 971

Query: 202  HHYLIHREFLIKSDHEALHYLNTQKDVSTRHIKWNSFLQKYTFHLQFQAGKDNR 363
             HYL ++EF++ SDHEAL YLN+QK +++RH KW+SFLQ +TF+L+  AG +N+
Sbjct: 972  QHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENK 1025


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/114 (64%), Positives = 93/114 (81%)
 Frame = +1

Query: 22   PDFAQLFEITCDACKYGIGAVLSQNGKPVAFYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 201
            PDF ++FE+ CDA   GIGAVLSQ G PVAF+SEKL GAK  YSTYDLE+YAVVQA+RHW
Sbjct: 837  PDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHW 896

Query: 202  HHYLIHREFLIKSDHEALHYLNTQKDVSTRHIKWNSFLQKYTFHLQFQAGKDNR 363
             HYL ++EF++ SDHEAL YLN+QK +++RH KW+SFLQ +TF+L   AG +N+
Sbjct: 897  QHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLXHCAGIENK 950


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score =  159 bits (402), Expect = 2e-37
 Identities = 72/114 (63%), Positives = 92/114 (80%)
 Frame = +1

Query: 22  PDFAQLFEITCDACKYGIGAVLSQNGKPVAFYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 201
           PDF ++FE+ CDA   GIGAVLSQ G  VAF+SEKL GAK  YSTYDLE+YA+VQA+RHW
Sbjct: 238 PDFEKVFEVACDASHVGIGAVLSQEGHLVAFFSEKLNGAKKKYSTYDLEFYAMVQAIRHW 297

Query: 202 HHYLIHREFLIKSDHEALHYLNTQKDVSTRHIKWNSFLQKYTFHLQFQAGKDNR 363
            HYL ++EF + SDHEAL YLN+QK +++RH KW+SFLQ +TF+L+  AG +N+
Sbjct: 298 QHYLSYKEFFLYSDHEALQYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENK 351


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  151 bits (381), Expect = 6e-35
 Identities = 67/114 (58%), Positives = 89/114 (78%)
 Frame = +1

Query: 22  PDFAQLFEITCDACKYGIGAVLSQNGKPVAFYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 201
           PDF+++FE+ CDA   GIG VLSQ   P+A++S KL+GAKLNYSTYD E+YAVVQ++RHW
Sbjct: 238 PDFSKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFYAVVQSLRHW 297

Query: 202 HHYLIHREFLIKSDHEALHYLNTQKDVSTRHIKWNSFLQKYTFHLQFQAGKDNR 363
            HYL+ +EF+I SDHEAL YLN+QK ++ R  +W  FLQ YT+ L+  AG +N+
Sbjct: 298 RHYLLPQEFVIYSDHEALRYLNSQKKLNARRARWVEFLQDYTYTLKHMAGVENK 351


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/113 (57%), Positives = 85/113 (75%)
 Frame = +1

Query: 22   PDFAQLFEITCDACKYGIGAVLSQNGKPVAFYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 201
            PDF QLFE+ CDA   GIGAVL Q+ KPVA++SEKL GAKL YSTYD E+YA+++A+ HW
Sbjct: 905  PDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRALMHW 964

Query: 202  HHYLIHREFLIKSDHEALHYLNTQKDVSTRHIKWNSFLQKYTFHLQFQAGKDN 360
            +HYL  + F++ SDHEAL Y+N Q  ++ RH KW  FLQ +TF  +++ GK N
Sbjct: 965  NHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGKKN 1017


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