BLASTX nr result

ID: Coptis23_contig00035923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035923
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38138.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242...    60   2e-07
emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]    60   2e-07

>emb|CBI38138.3| unnamed protein product [Vitis vinifera]
          Length = 1310

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
 Frame = -1

Query: 293 GQSMPVLPLHTP----SEESTYFEIEVKDNADLVVSPDTKSLGSILACNEIPIELCKANV 126
           G + P++    P     E     ++E K  +D   S D+K   S LAC+++P+   K+  
Sbjct: 431 GDNFPIIMTSVPVLKSPEAFENCDMEAKSGSDEEKSHDSKRPLSPLACSDVPLNDVKSGG 490

Query: 125 NNEEDQMKLKDDIYTMLDAQSILYSVSSWSLLKRTICKKRH 3
            NE DQM+ KDDI T+LD+QSIL  +SS +  K  IC++ H
Sbjct: 491 KNE-DQMQSKDDISTVLDSQSILVLMSSRNASKGRICEQSH 530


>ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242669 [Vitis vinifera]
          Length = 1601

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/94 (39%), Positives = 55/94 (58%)
 Frame = -1

Query: 284 MPVLPLHTPSEESTYFEIEVKDNADLVVSPDTKSLGSILACNEIPIELCKANVNNEEDQM 105
           M  +P+    E     ++E K  +D   S D+K   S LAC+++P+   K+   NE DQM
Sbjct: 580 MTSVPVLKSPEAFENCDMEAKSGSDEEKSHDSKRPLSPLACSDVPLNDVKSGGKNE-DQM 638

Query: 104 KLKDDIYTMLDAQSILYSVSSWSLLKRTICKKRH 3
           + KDDI T+LD+QSIL  +SS +  K  IC++ H
Sbjct: 639 QSKDDISTVLDSQSILVLMSSRNASKGRICEQSH 672


>emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]
          Length = 1517

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/94 (39%), Positives = 55/94 (58%)
 Frame = -1

Query: 284 MPVLPLHTPSEESTYFEIEVKDNADLVVSPDTKSLGSILACNEIPIELCKANVNNEEDQM 105
           M  +P+    E     ++E K  +D   S D+K   S LAC+++P+   K+   NE DQM
Sbjct: 527 MTSVPVLKSPEAFENCDMEAKSGSDEEKSHDSKRPLSPLACSDVPLNDVKSGGKNE-DQM 585

Query: 104 KLKDDIYTMLDAQSILYSVSSWSLLKRTICKKRH 3
           + KDDI T+LD+QSIL  +SS +  K  IC++ H
Sbjct: 586 QSKDDISTVLDSQSILVLMSSRNASKGRICEQSH 619


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