BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035909
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   113   1e-23
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20

>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/75 (66%), Positives = 65/75 (86%)
 Frame = +3

Query: 3   LIFGYSLWGRSKEALLLIRQMKTLGLNPNVVSWTAIISGCSQMENYKDSLELFLQMQEEG 182
           L+ GYS+WG ++EAL +I ++K+ GL PNVVSWTA+ISGCSQ  NYK+SLE F+QMQ+EG
Sbjct: 509 LVSGYSIWGHNEEALAVINEIKSSGLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEG 568

Query: 183 IEPNSTTISSLLRAC 227
           I+PNSTT+SSLL+ C
Sbjct: 569 IKPNSTTVSSLLKTC 583


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/76 (67%), Positives = 64/76 (84%)
 Frame = +3

Query: 3   LIFGYSLWGRSKEALLLIRQMKTLGLNPNVVSWTAIISGCSQMENYKDSLELFLQMQEEG 182
           L+ GYS+ GRS+EAL +I ++K+LGL PNVVSWTA+ISGC Q ENY D+L+ F QMQEE 
Sbjct: 475 LVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEEN 534

Query: 183 IEPNSTTISSLLRACA 230
           ++PNSTTI +LLRACA
Sbjct: 535 VKPNSTTICTLLRACA 550


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/76 (67%), Positives = 64/76 (84%)
 Frame = +3

Query: 3   LIFGYSLWGRSKEALLLIRQMKTLGLNPNVVSWTAIISGCSQMENYKDSLELFLQMQEEG 182
           L+ GYS+ G S+EAL +I ++K+LGL PNVVSWTA+ISGC Q ENY D+L+ F QMQEE 
Sbjct: 475 LVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEEN 534

Query: 183 IEPNSTTISSLLRACA 230
           ++PNSTTIS+LLRACA
Sbjct: 535 VKPNSTTISTLLRACA 550


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/75 (68%), Positives = 60/75 (80%)
 Frame = +3

Query: 3   LIFGYSLWGRSKEALLLIRQMKTLGLNPNVVSWTAIISGCSQMENYKDSLELFLQMQEEG 182
           L+ GYS+ G +KEAL LI  +K  GL PNVVSWTA+ISGCSQ  NY +S+E F+QMQEEG
Sbjct: 64  LVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCSQNGNYSESIEAFVQMQEEG 123

Query: 183 IEPNSTTISSLLRAC 227
           I+PNS TISSLLR C
Sbjct: 124 IKPNSATISSLLRTC 138


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = +3

Query: 3   LIFGYSLWGRSKEALLLIRQMKTLGLNPNVVSWTAIISGCSQMENYKDSLELFLQMQEEG 182
           +I GY++WG  KEAL ++ Q K+LGL PNVVSWTA+ISG SQ  N +DSL+ F QMQ+EG
Sbjct: 477 MISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEG 536

Query: 183 IEPNSTTISSLLRACA 230
           + PNS +I+ LLRACA
Sbjct: 537 VMPNSASITCLLRACA 552