BLASTX nr result

ID: Coptis23_contig00035886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035886
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516868.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
emb|CBI26113.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251...    60   2e-07
emb|CAN63394.1| hypothetical protein VITISV_001889 [Vitis vinifera]    58   9e-07
ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002516868.1| conserved hypothetical protein [Ricinus communis]
           gi|223543956|gb|EEF45482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = +2

Query: 17  VSPSLKGSESFHKFPYVIFCAPPSRTADYPSNVR 118
           ++PSLKG++  H+FPYVIFCAPPSRT+DYP +VR
Sbjct: 76  INPSLKGTKPIHQFPYVIFCAPPSRTSDYPGDVR 109


>emb|CBI26113.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 32/34 (94%)
 Frame = +2

Query: 17  VSPSLKGSESFHKFPYVIFCAPPSRTADYPSNVR 118
           ++PSLKG ++ H+FPYVIFCAPPSRT+DYP++VR
Sbjct: 191 INPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVR 224


>ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251108 [Vitis vinifera]
          Length = 343

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/34 (70%), Positives = 32/34 (94%)
 Frame = +2

Query: 17  VSPSLKGSESFHKFPYVIFCAPPSRTADYPSNVR 118
           ++PSLKG ++ H+FPYVIFCAPPSRT+DYP++VR
Sbjct: 127 INPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVR 160


>emb|CAN63394.1| hypothetical protein VITISV_001889 [Vitis vinifera]
          Length = 297

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +2

Query: 17  VSPSLKGSESFHKFPYVIFCAPPSRTADYPSNVR 118
           ++PSLKG ++ H+FPYVIFCAPPS T+DYP++VR
Sbjct: 127 INPSLKGVKTTHQFPYVIFCAPPSXTSDYPADVR 160


>ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|222851663|gb|EEE89210.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/34 (64%), Positives = 31/34 (91%)
 Frame = +2

Query: 17  VSPSLKGSESFHKFPYVIFCAPPSRTADYPSNVR 118
           ++PSLKG+++  ++PYVIFCAPPSRT+DYP +VR
Sbjct: 76  INPSLKGTKATQQYPYVIFCAPPSRTSDYPGDVR 109


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