BLASTX nr result

ID: Coptis23_contig00035884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035884
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29439.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249...   109   3e-22
emb|CAN67144.1| hypothetical protein VITISV_044255 [Vitis vinifera]   109   3e-22
ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>emb|CBI29439.3| unnamed protein product [Vitis vinifera]
          Length = 794

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 ERYIDDFLSNVEDTDISSFDGERSDASSTL-GVKKPKDLILHYGESEAAGCSIRSTSLPV 80
           E+Y +DF+SNVEDTDISSFDGERSD SSTL G+ KP++   H  E E       S SLP 
Sbjct: 600 EKYFEDFISNVEDTDISSFDGERSDGSSTLSGITKPREPEKHSREPEIFRSPAPSYSLPS 659

Query: 79  EMDGVVLPWLQWETSNDGSPLLCKSK 2
           EMDG+VLPWLQWET ND SPL C  K
Sbjct: 660 EMDGLVLPWLQWETHNDSSPLSCNKK 685


>ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249354 [Vitis vinifera]
          Length = 572

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 ERYIDDFLSNVEDTDISSFDGERSDASSTL-GVKKPKDLILHYGESEAAGCSIRSTSLPV 80
           E+Y +DF+SNVEDTDISSFDGERSD SSTL G+ KP++   H  E E       S SLP 
Sbjct: 378 EKYFEDFISNVEDTDISSFDGERSDGSSTLSGITKPREPEKHSREPEIFRSPAPSYSLPS 437

Query: 79  EMDGVVLPWLQWETSNDGSPLLCKSK 2
           EMDG+VLPWLQWET ND SPL C  K
Sbjct: 438 EMDGLVLPWLQWETHNDSSPLSCNKK 463


>emb|CAN67144.1| hypothetical protein VITISV_044255 [Vitis vinifera]
          Length = 622

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 ERYIDDFLSNVEDTDISSFDGERSDASSTL-GVKKPKDLILHYGESEAAGCSIRSTSLPV 80
           E+Y +DF+SNVEDTDISSFDGERSD SSTL G+ KP++   H  E E       S SLP 
Sbjct: 371 EKYFEDFISNVEDTDISSFDGERSDGSSTLSGITKPREPEKHSREPEIFRSPXPSYSLPS 430

Query: 79  EMDGVVLPWLQWETSNDGSPLLCKSK 2
           EMDG+VLPWLQWET ND SPL C  K
Sbjct: 431 EMDGLVLPWLQWETHNDSSPLSCNKK 456


>ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|222868676|gb|EEF05807.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/85 (60%), Positives = 59/85 (69%)
 Frame = -1

Query: 256 ERYIDDFLSNVEDTDISSFDGERSDASSTLGVKKPKDLILHYGESEAAGCSIRSTSLPVE 77
           E+Y +DF+SNVEDTDISS DGERSD SSTLG            ++E     + S S PVE
Sbjct: 377 EKYFEDFISNVEDTDISSLDGERSDTSSTLG---------GIAKTETFQRPVISKSQPVE 427

Query: 76  MDGVVLPWLQWETSNDGSPLLCKSK 2
           MDGV+LPWLQWETSND SPL  K+K
Sbjct: 428 MDGVLLPWLQWETSNDSSPLSLKNK 452


>ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|222858788|gb|EEE96335.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/85 (57%), Positives = 58/85 (68%)
 Frame = -1

Query: 256 ERYIDDFLSNVEDTDISSFDGERSDASSTLGVKKPKDLILHYGESEAAGCSIRSTSLPVE 77
           E+Y +DF++NVEDTDISS DGERSD SSTLG            ++E     + S S PVE
Sbjct: 376 EKYFEDFITNVEDTDISSLDGERSDTSSTLG---------GITKTETFRSPVISKSRPVE 426

Query: 76  MDGVVLPWLQWETSNDGSPLLCKSK 2
           MDG+ LPWLQWETSND SPL  K+K
Sbjct: 427 MDGIALPWLQWETSNDASPLSIKNK 451


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