BLASTX nr result

ID: Coptis23_contig00035879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035879
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...   103   1e-20
emb|CBI23880.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    84   1e-14
ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cuc...    75   7e-12

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/107 (45%), Positives = 75/107 (70%)
 Frame = +2

Query: 2   QASNAFELCCRSAWTLVSHVCGKSVERSEQIHDELSEEEITQFVIEACIKSATLLDVLNQ 181
           +AS A +LCCR++W  VS +C   +E+S+ +HD+LSE+ IT FV+EAC +S+ LLD+++Q
Sbjct: 605 EASKAIKLCCRASWARVSFLCQMFLEKSKGLHDDLSEDAITDFVMEACKESSFLLDIVHQ 664

Query: 182 CESPVFQRSMITTLVNWSVTVDSFETLDGLTALVMKWVKIMCKDNKD 322
            +S   +  ++++L NWS   + F  L   TALV +WVKI CK +KD
Sbjct: 665 FDSGKVKSIVMSSLENWSAAANLFNMLPCPTALVKQWVKIECKLSKD 711


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/107 (45%), Positives = 75/107 (70%)
 Frame = +2

Query: 2   QASNAFELCCRSAWTLVSHVCGKSVERSEQIHDELSEEEITQFVIEACIKSATLLDVLNQ 181
           +AS A +LCCR++W  VS +C   +E+S+ +HD+LSE+ IT FV+EAC +S+ LLD+++Q
Sbjct: 552 EASKAIKLCCRASWARVSFLCQMFLEKSKGLHDDLSEDAITDFVMEACKESSFLLDIVHQ 611

Query: 182 CESPVFQRSMITTLVNWSVTVDSFETLDGLTALVMKWVKIMCKDNKD 322
            +S   +  ++++L NWS   + F  L   TALV +WVKI CK +KD
Sbjct: 612 FDSGKVKSIVMSSLENWSAAANLFNMLPCPTALVKQWVKIECKLSKD 658


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
           separase, putative [Ricinus communis]
          Length = 2153

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/112 (39%), Positives = 66/112 (58%)
 Frame = +2

Query: 2   QASNAFELCCRSAWTLVSHVCGKSVERSEQIHDELSEEEITQFVIEACIKSATLLDVLNQ 181
           +AS A +L CR++WT     C   + +S   + +LSE+ I+ F+ EAC ++A LLD++ Q
Sbjct: 550 EASKALKLSCRASWTCAVLFCQMYMNKS---NGDLSEDVISDFITEACTRTAFLLDIVYQ 606

Query: 182 CESPVFQRSMITTLVNWSVTVDSFETLDGLTALVMKWVKIMCKDNKDAGAVD 337
           C S   ++ ++  L NWSV  D F +L G   LV +WVKI CK  K+    D
Sbjct: 607 CGSLKLKKIIVNGLENWSVAEDLFRSLPGPMPLVKQWVKIECKRIKNLDVDD 658


>ref|XP_002303173.1| predicted protein [Populus trichocarpa] gi|222840605|gb|EEE78152.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/100 (39%), Positives = 60/100 (60%)
 Frame = +2

Query: 2   QASNAFELCCRSAWTLVSHVCGKSVERSEQIHDELSEEEITQFVIEACIKSATLLDVLNQ 181
           +A    +LCCR++W  V  +   S+++SE    +LSE+ I  FV EAC ++  LLDVL++
Sbjct: 577 EALKPLKLCCRASWKCVKLLSEMSMQKSEGFVGDLSEDAILDFVTEACNQTVFLLDVLHK 636

Query: 182 CESPVFQRSMITTLVNWSVTVDSFETLDGLTALVMKWVKI 301
             S   ++ ++ +L NWSV  D F  L G   LV +WVK+
Sbjct: 637 SGSLRVKKIIVNSLENWSVAEDLFRRLSGPVPLVKQWVKV 676


>ref|XP_004163947.1| PREDICTED: uncharacterized LOC101203087 [Cucumis sativus]
          Length = 2165

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/107 (36%), Positives = 57/107 (53%)
 Frame = +2

Query: 2   QASNAFELCCRSAWTLVSHVCGKSVERSEQIHDELSEEEITQFVIEACIKSATLLDVLNQ 181
           +AS A +LCC ++WT V   C    ++S     E SE  +  FV E   +SA L+D+L Q
Sbjct: 595 EASKALKLCCSASWTCVRQFCQMLDDKSRPTDSEFSENTVLSFVNEVITRSAFLIDMLYQ 654

Query: 182 CESPVFQRSMITTLVNWSVTVDSFETLDGLTALVMKWVKIMCKDNKD 322
            +    +R+M   L +WS+    F  L     LV +WVKI CK +K+
Sbjct: 655 RDMHKVERAMSEILKSWSMGATLFNGLPVPVQLVKQWVKIQCKHHKN 701


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