BLASTX nr result

ID: Coptis23_contig00035869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035869
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15955.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002279113.2| PREDICTED: uncharacterized protein LOC100248...   131   8e-29
emb|CAN79814.1| hypothetical protein VITISV_018620 [Vitis vinifera]   131   8e-29
ref|XP_003551275.1| PREDICTED: uncharacterized protein LOC100795...   113   2e-23
ref|XP_003538291.1| PREDICTED: uncharacterized protein LOC100791...   113   2e-23

>emb|CBI15955.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  133 bits (334), Expect = 2e-29
 Identities = 79/192 (41%), Positives = 105/192 (54%), Gaps = 18/192 (9%)
 Frame = +1

Query: 28  SRTFTDCVDSGEDNLAKSQFPDRMSDSTDSSRGYLDVLVG---------------PKRQC 162
           S   TD       + ++S+  D         R Y +VL                 P +Q 
Sbjct: 214 SDNLTDGASDSTSHSSESELQDNARPLDHYFRNYAEVLASSETCSPSSPRISQLDPAQQV 273

Query: 163 MSSQTSSPRSCSELETDSKNWTTVVKKM---GSSFGSRMQHCAETLQNTDYAKGDDYKVL 333
           +    + P+S SE E  + NW  V KKM   G  F        E   N+ YAKGD+Y+V 
Sbjct: 274 LEYLFNIPKS-SEQEPSTMNWRNVAKKMESLGQGFDFHRSGVVEPQPNS-YAKGDEYQVY 331

Query: 334 RKAATRHYDAMKSYYEKVATAYSNGQRSYTSYLSEQGKVHNKVAREVDEKANPEIFEARN 513
           RKAA + +D++KS Y+K ATAYS G+ +Y +YLS+QGKV  KVARE DEKA+  IFEARN
Sbjct: 332 RKAANQQWDSVKSCYQKAATAYSKGELTYAAYLSDQGKVQTKVAREADEKASQNIFEARN 391

Query: 514 KGIQNIVTIDLH 549
           K I+N++TIDLH
Sbjct: 392 KSIKNVITIDLH 403


>ref|XP_002279113.2| PREDICTED: uncharacterized protein LOC100248399 [Vitis vinifera]
          Length = 450

 Score =  131 bits (329), Expect = 8e-29
 Identities = 70/137 (51%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
 Frame = +1

Query: 148 PKRQCMSSQTSSPRSCSELETDSKNWTTVVKKM---GSSFGSRMQHCAETLQNTDYAKGD 318
           P +Q +    + P+S SE E  + NW  V KKM   G  F        E   N+ YAKGD
Sbjct: 230 PAQQVLEYLFNIPKS-SEQEPSTMNWRNVAKKMESLGQGFDFHRSGVVEPQPNS-YAKGD 287

Query: 319 DYKVLRKAATRHYDAMKSYYEKVATAYSNGQRSYTSYLSEQGKVHNKVAREVDEKANPEI 498
           +Y+V RKAA + +D++KS Y+K ATAYS G+ +Y +YLS+QGKV  KVARE DEKA+  I
Sbjct: 288 EYQVYRKAANQQWDSVKSCYQKAATAYSKGELTYAAYLSDQGKVQTKVAREADEKASQNI 347

Query: 499 FEARNKGIQNIVTIDLH 549
           FEARNK I+N++TIDLH
Sbjct: 348 FEARNKSIKNVITIDLH 364


>emb|CAN79814.1| hypothetical protein VITISV_018620 [Vitis vinifera]
          Length = 896

 Score =  131 bits (329), Expect = 8e-29
 Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 18/192 (9%)
 Frame = +1

Query: 28   SRTFTDCVDSGEDNLAKSQFPDRMSDSTDSSRGYLDVLVG---------------PKRQC 162
            S   TD       + ++S+  D         R Y +VL                 P +Q 
Sbjct: 621  SDNLTDGASDSTSHSSESELQDNARPLDHYFRNYAEVLASSETCSPSSPRISQLDPAQQV 680

Query: 163  MSSQTSSPRSCSELETDSKNWTTVVKKM---GSSFGSRMQHCAETLQNTDYAKGDDYKVL 333
            +    + P+S SE E  + NW  V KKM   G  F        E   N+ YAKGD+Y+  
Sbjct: 681  LEYLFNIPKS-SEQEPSTMNWRNVAKKMESLGQGFDFHRSGVVEPQPNS-YAKGDEYQXY 738

Query: 334  RKAATRHYDAMKSYYEKVATAYSNGQRSYTSYLSEQGKVHNKVAREVDEKANPEIFEARN 513
            RKAA + +D++KS Y+K ATAYS G+ +Y +YLS+QGKV  KVARE DEKA+  IFEARN
Sbjct: 739  RKAANQQWDSVKSCYQKAATAYSKGELTYAAYLSDQGKVQTKVAREADEKASQNIFEARN 798

Query: 514  KGIQNIVTIDLH 549
            K I+N++TIDLH
Sbjct: 799  KSIKNVITIDLH 810


>ref|XP_003551275.1| PREDICTED: uncharacterized protein LOC100795279 [Glycine max]
          Length = 509

 Score =  113 bits (283), Expect = 2e-23
 Identities = 61/135 (45%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
 Frame = +1

Query: 154 RQCMSSQTSSPRSCSELETDSKNWTTVVKK---MGSSFGSRMQHCAETLQNTDYAKGDDY 324
           ++ + S  + P+S +E + D+ NW  VVKK   +G  F     H AE+ Q+T  AKGD+Y
Sbjct: 289 QKVLESLFNIPKS-TEHDKDTMNWRNVVKKIQSLGPGFNVS-PHVAESQQHT-CAKGDEY 345

Query: 325 KVLRKAATRHYDAMKSYYEKVATAYSNGQRSYTSYLSEQGKVHNKVAREVDEKANPEIFE 504
            V R+ + + +D++KSYY K ATAY+  +R+Y +YLS+QGK   ++A++ D KA+ +IF 
Sbjct: 346 HVFREDSKQQWDSVKSYYTKAATAYTKRERAYAAYLSDQGKEQTRLAQKADTKASHDIFI 405

Query: 505 ARNKGIQNIVTIDLH 549
           ARNKGI+N++TIDLH
Sbjct: 406 ARNKGIENMITIDLH 420


>ref|XP_003538291.1| PREDICTED: uncharacterized protein LOC100791618 [Glycine max]
          Length = 512

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
 Frame = +1

Query: 154 RQCMSSQTSSPRSCSELETDSKNWTTVVKKMGSSFGSRMQ---HCAETLQNTDYAKGDDY 324
           ++ + S  + P+S +E + ++ NW  VVKK+  S G       H AE+ Q T  AKGD+Y
Sbjct: 292 QKVLESLFNIPKS-TEHDKNTMNWRNVVKKI-QSLGPGFYVSPHVAESQQRT-CAKGDEY 348

Query: 325 KVLRKAATRHYDAMKSYYEKVATAYSNGQRSYTSYLSEQGKVHNKVAREVDEKANPEIFE 504
            V R+ + + +D++KSYY K ATAY+  +R+Y +YLS+QGK   K+A++ D KA+ +IF 
Sbjct: 349 HVFREDSRKQWDSVKSYYTKAATAYTKRERAYAAYLSDQGKEQTKLAQKADTKASHDIFV 408

Query: 505 ARNKGIQNIVTIDLH 549
           ARNKGI+N++TIDLH
Sbjct: 409 ARNKGIENVITIDLH 423


Top