BLASTX nr result

ID: Coptis23_contig00035852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035852
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241...   196   2e-48
emb|CBI16215.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali...   176   2e-42
dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]        176   2e-42

>ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera]
          Length = 694

 Score =  196 bits (497), Expect = 2e-48
 Identities = 100/152 (65%), Positives = 119/152 (78%)
 Frame = +1

Query: 4   TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183
           +RIK+V K +ELGY+G+AYN  IK   MSDSDSC               +L +SV+FHR 
Sbjct: 21  SRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRS 79

Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363
           LL VPL +PFRQYTRLTV+VDS  QA++LNSGNPVLKSYDLVAV+PLNQ+ FD  C+V+ 
Sbjct: 80  LLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSE 139

Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459
           VDLIAIDFSEKLPFRL LP+VKAA+KRG+YFE
Sbjct: 140 VDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFE 171


>emb|CBI16215.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  196 bits (497), Expect = 2e-48
 Identities = 100/152 (65%), Positives = 119/152 (78%)
 Frame = +1

Query: 4   TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183
           +RIK+V K +ELGY+G+AYN  IK   MSDSDSC               +L +SV+FHR 
Sbjct: 21  SRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRS 79

Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363
           LL VPL +PFRQYTRLTV+VDS  QA++LNSGNPVLKSYDLVAV+PLNQ+ FD  C+V+ 
Sbjct: 80  LLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSE 139

Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459
           VDLIAIDFSEKLPFRL LP+VKAA+KRG+YFE
Sbjct: 140 VDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFE 171


>ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  178 bits (452), Expect = 4e-43
 Identities = 95/152 (62%), Positives = 108/152 (71%)
 Frame = +1

Query: 4   TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183
           TRIKLV K +ELGY+GIAYN SIK   MSD D C                L  SV  HRD
Sbjct: 15  TRIKLVVKAMELGYSGIAYNRSIKGI-MSDHDRCTIPLLSLSSLLDVAPALAFSVNLHRD 73

Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363
           LL +P  +PFRQYTRLTVSVD+  QA  LNSGNPVLK+YD VAVKPL+Q  FDH C  + 
Sbjct: 74  LLGIPRSSPFRQYTRLTVSVDTPSQAQVLNSGNPVLKTYDFVAVKPLSQTAFDHACLKSE 133

Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459
           VD+IAIDFS KLPFRL LP+VKAA++RG+YFE
Sbjct: 134 VDMIAIDFSVKLPFRLKLPMVKAAIERGVYFE 165


>ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
           gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30
           [Arabidopsis thaliana]
          Length = 581

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/151 (59%), Positives = 110/151 (72%)
 Frame = +1

Query: 7   RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRDL 186
           R+KL TK +ELGY GIA+N SIK   MSD DSC                L +SV FHRDL
Sbjct: 28  RLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDL 86

Query: 187 LRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVV 366
           L VP  TPFRQYTRLTV V+S  Q  SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A V
Sbjct: 87  LGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEV 146

Query: 367 DLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459
           DLI+IDF++K+ FRL  P+VKAA++RGIYFE
Sbjct: 147 DLISIDFTDKMLFRLKHPMVKAAIQRGIYFE 177


>dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 680

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/151 (59%), Positives = 110/151 (72%)
 Frame = +1

Query: 7   RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRDL 186
           R+KL TK +ELGY GIA+N SIK   MSD DSC                L +SV FHRDL
Sbjct: 28  RLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDL 86

Query: 187 LRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVV 366
           L VP  TPFRQYTRLTV V+S  Q  SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A V
Sbjct: 87  LGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEV 146

Query: 367 DLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459
           DLI+IDF++K+ FRL  P+VKAA++RGIYFE
Sbjct: 147 DLISIDFTDKMLFRLKHPMVKAAIQRGIYFE 177


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