BLASTX nr result
ID: Coptis23_contig00035852
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00035852 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241... 196 2e-48 emb|CBI16215.3| unnamed protein product [Vitis vinifera] 196 2e-48 ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2... 178 4e-43 ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali... 176 2e-42 dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] 176 2e-42 >ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera] Length = 694 Score = 196 bits (497), Expect = 2e-48 Identities = 100/152 (65%), Positives = 119/152 (78%) Frame = +1 Query: 4 TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183 +RIK+V K +ELGY+G+AYN IK MSDSDSC +L +SV+FHR Sbjct: 21 SRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRS 79 Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363 LL VPL +PFRQYTRLTV+VDS QA++LNSGNPVLKSYDLVAV+PLNQ+ FD C+V+ Sbjct: 80 LLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSE 139 Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459 VDLIAIDFSEKLPFRL LP+VKAA+KRG+YFE Sbjct: 140 VDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFE 171 >emb|CBI16215.3| unnamed protein product [Vitis vinifera] Length = 667 Score = 196 bits (497), Expect = 2e-48 Identities = 100/152 (65%), Positives = 119/152 (78%) Frame = +1 Query: 4 TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183 +RIK+V K +ELGY+G+AYN IK MSDSDSC +L +SV+FHR Sbjct: 21 SRIKVVVKAMELGYSGVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRS 79 Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363 LL VPL +PFRQYTRLTV+VDS QA++LNSGNPVLKSYDLVAV+PLNQ+ FD C+V+ Sbjct: 80 LLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSE 139 Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459 VDLIAIDFSEKLPFRL LP+VKAA+KRG+YFE Sbjct: 140 VDLIAIDFSEKLPFRLKLPMVKAAIKRGVYFE 171 >ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1| predicted protein [Populus trichocarpa] Length = 324 Score = 178 bits (452), Expect = 4e-43 Identities = 95/152 (62%), Positives = 108/152 (71%) Frame = +1 Query: 4 TRIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRD 183 TRIKLV K +ELGY+GIAYN SIK MSD D C L SV HRD Sbjct: 15 TRIKLVVKAMELGYSGIAYNRSIKGI-MSDHDRCTIPLLSLSSLLDVAPALAFSVNLHRD 73 Query: 184 LLRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAV 363 LL +P +PFRQYTRLTVSVD+ QA LNSGNPVLK+YD VAVKPL+Q FDH C + Sbjct: 74 LLGIPRSSPFRQYTRLTVSVDTPSQAQVLNSGNPVLKTYDFVAVKPLSQTAFDHACLKSE 133 Query: 364 VDLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459 VD+IAIDFS KLPFRL LP+VKAA++RG+YFE Sbjct: 134 VDMIAIDFSVKLPFRLKLPMVKAAIERGVYFE 165 >ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] Length = 581 Score = 176 bits (445), Expect = 2e-42 Identities = 90/151 (59%), Positives = 110/151 (72%) Frame = +1 Query: 7 RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRDL 186 R+KL TK +ELGY GIA+N SIK MSD DSC L +SV FHRDL Sbjct: 28 RLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDL 86 Query: 187 LRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVV 366 L VP TPFRQYTRLTV V+S Q SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A V Sbjct: 87 LGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEV 146 Query: 367 DLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459 DLI+IDF++K+ FRL P+VKAA++RGIYFE Sbjct: 147 DLISIDFTDKMLFRLKHPMVKAAIQRGIYFE 177 >dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] Length = 680 Score = 176 bits (445), Expect = 2e-42 Identities = 90/151 (59%), Positives = 110/151 (72%) Frame = +1 Query: 7 RIKLVTKLIELGYTGIAYNHSIKATAMSDSDSCXXXXXXXXXXXXXXXNLFTSVKFHRDL 186 R+KL TK +ELGY GIA+N SIK MSD DSC L +SV FHRDL Sbjct: 28 RLKLATKAMELGYVGIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDL 86 Query: 187 LRVPLDTPFRQYTRLTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVV 366 L VP TPFRQYTRLTV V+S Q SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A V Sbjct: 87 LGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEV 146 Query: 367 DLIAIDFSEKLPFRLNLPIVKAAMKRGIYFE 459 DLI+IDF++K+ FRL P+VKAA++RGIYFE Sbjct: 147 DLISIDFTDKMLFRLKHPMVKAAIQRGIYFE 177