BLASTX nr result

ID: Coptis23_contig00035848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035848
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    67   8e-11
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    64   7e-10
emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera]    63   2e-09
emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera]    62   2e-08
emb|CAN83533.1| hypothetical protein VITISV_014043 [Vitis vinifera]    60   2e-08

>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 67.4 bits (163), Expect(2) = 8e-11
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +1

Query: 7    FTWLDKKVNPVQSKLDRFLASSEWEESWPRLMESVVTSTASDHHPISLVKEIGRGRPTPF 186
            FTW + +VNPV  +LDRFL S+EWE+++P+ ++ V+    SDH PI L     +  PTPF
Sbjct: 1011 FTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPF 1070

Query: 187  RFE 195
            RFE
Sbjct: 1071 RFE 1073



 Score = 23.9 bits (50), Expect(2) = 8e-11
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 173  GPPRFVL-SLWFSDPKLVDHISEWWTVLVDQVGDKVGTIFANKLKFV 310
            GP  F   ++W   P   ++   WW     Q     G  F  KL+FV
Sbjct: 1066 GPTPFRFENMWLQHPSFKENFGRWWREF--QGNGWEGHKFMRKLQFV 1110


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 64.3 bits (155), Expect(2) = 7e-10
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = +1

Query: 7    FTWLDKKVNPVQSKLDRFLASSEWEESWPRLMESVVTSTASDHHPISLVKEIGRGRPTPF 186
            FTW + +VN V  +LDRFL S+EWE+++P+ ++ V+    SDH PI L     +  PTPF
Sbjct: 845  FTWSNMQVNXVCKRLDRFLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPF 904

Query: 187  RFE 195
            RFE
Sbjct: 905  RFE 907



 Score = 23.9 bits (50), Expect(2) = 7e-10
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 173  GPPRFVL-SLWFSDPKLVDHISEWWTVLVDQVGDKVGTIFANKLKFV 310
            GP  F   ++W   P   ++   WW     Q     G  F  KL+FV
Sbjct: 900  GPTPFRFENMWLQHPSFKENFGRWWREF--QGNGWEGHKFMRKLQFV 944


>emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera]
          Length = 1031

 Score = 62.8 bits (151), Expect(2) = 2e-09
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = +1

Query: 7   FTWLDKKVNPVQSKLDRFLASSEWEESWPRLMESVVTSTASDHHPISLVKEIGRGRPTPF 186
           FTW + + NPV  +LDRFL S+EWE+++P+ ++ V+    SDH PI L     +  PTPF
Sbjct: 151 FTWSNMQENPVCKRLDRFLYSTEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPF 210

Query: 187 RFE 195
            FE
Sbjct: 211 XFE 213



 Score = 23.9 bits (50), Expect(2) = 2e-09
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
 Frame = +2

Query: 173 GPPRFVL-SLWFSDPKLVDHISEWWTVLVDQVGDKVGTIFANKLKFV 310
           GP  F   ++W   P   +    WW     Q     G  F  KL+FV
Sbjct: 206 GPTPFXFENMWLQHPSFKESFGRWWREF--QGNGWEGHKFMRKLQFV 250


>emb|CAN67224.1| hypothetical protein VITISV_029053 [Vitis vinifera]
          Length = 1120

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = +1

Query: 7   FTWLDKKVNPVQSKLDRFLASSEWEESWPRLMESVVTSTASDHHPISLVKEIGRGRPTPF 186
           FTW + + +PV  +LDRFL S+EWE+ +P+ ++ V+    SDH PI L     +  PTPF
Sbjct: 256 FTWSNMQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLPRWTSDHWPIVLETNPFKWDPTPF 315

Query: 187 RFE 195
           RFE
Sbjct: 316 RFE 318



 Score = 21.2 bits (43), Expect(2) = 2e-08
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = +2

Query: 194 SLWFSDPKLVDHISEWWTVLVDQVGDKVGTIFANKLKFV 310
           ++W   P   +    WW     Q     G  F  KL+F+
Sbjct: 319 NMWLQHPSFKESFKSWWREF--QGDGWEGHKFMRKLQFL 355


>emb|CAN83533.1| hypothetical protein VITISV_014043 [Vitis vinifera]
          Length = 1337

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = +1

Query: 7   FTWLDKKVNPVQSKLDRFLASSEWEESWPRLMESVVTSTASDHHPISLVKEIGRGRPTPF 186
           FTW + + +PV  +LDRFL S+EWE  +P+ ++ V+    SDH PI L     +  PTPF
Sbjct: 807 FTWSNMQESPVCKRLDRFLYSNEWEHFFPQSLQEVLPRWTSDHWPIVLDTNHFKWGPTPF 866

Query: 187 RFE 195
           RF+
Sbjct: 867 RFK 869



 Score = 23.5 bits (49), Expect(2) = 2e-08
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 173 GPPRFVL-SLWFSDPKLVDHISEWWTVLVDQVGDKVGTIFANKLKFV 310
           GP  F   ++W   P   +  S WW     Q     G  F  KL+FV
Sbjct: 862 GPTPFRFKNMWLQHPSFKECFSSWWRGF--QGNGWEGHKFMRKLQFV 906


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