BLASTX nr result

ID: Coptis23_contig00035823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035823
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534505.1| conserved hypothetical protein [Ricinus comm...   111   5e-23
ref|XP_002314819.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002280363.2| PREDICTED: uncharacterized protein LOC100254...   105   5e-21
emb|CBI26928.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002887346.1| hypothetical protein ARALYDRAFT_476243 [Arab...   101   5e-20

>ref|XP_002534505.1| conserved hypothetical protein [Ricinus communis]
           gi|223525154|gb|EEF27875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/87 (60%), Positives = 61/87 (70%), Gaps = 8/87 (9%)
 Frame = +2

Query: 2   TAIYSYANTDPSPRAINYCNQSGLLIPPLCSPFDSELNDRQCGPQE--------VWQNYT 157
           T IY++AN +PSP   NY NQSG  +PPLC PFDS+L DRQCG QE        VW+NY 
Sbjct: 58  TYIYTFANANPSPTEFNYYNQSGPFMPPLCYPFDSQLQDRQCGFQEVSMTNASVVWKNYL 117

Query: 158 CVTSSSGFCTTAGRITPDFYTQLVAAV 238
           C  SS+G CTT GR+TPD Y QLVAAV
Sbjct: 118 CDVSSAGLCTTVGRVTPDIYKQLVAAV 144


>ref|XP_002314819.1| predicted protein [Populus trichocarpa] gi|222863859|gb|EEF00990.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/88 (60%), Positives = 60/88 (68%), Gaps = 8/88 (9%)
 Frame = +2

Query: 2   TAIYSYANTDPSPRAINYCNQSGLLIPPLCSPFDSELNDRQCGPQE--------VWQNYT 157
           T IY++AN +PS    NY NQSG  +PPLC PFDS   DRQC P+E        VWQNYT
Sbjct: 367 TYIYTFANANPSQTEFNYYNQSGPSMPPLCYPFDSLYQDRQCEPREVSMANASVVWQNYT 426

Query: 158 CVTSSSGFCTTAGRITPDFYTQLVAAVN 241
           C+ SSSG CTT GR+ PD Y QLVAAVN
Sbjct: 427 CMVSSSGLCTTVGRVIPDIYRQLVAAVN 454


>ref|XP_002280363.2| PREDICTED: uncharacterized protein LOC100254373 [Vitis vinifera]
          Length = 536

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 8/86 (9%)
 Frame = +2

Query: 8   IYSYANTDPSPRAINYCNQSGLLIPPLCSPFDSELNDRQCGPQE--------VWQNYTCV 163
           IY+YAN +PSP  +NY NQSG L+PPLC P+DS L DRQCG  E        VW+NY C 
Sbjct: 365 IYTYANANPSPTDLNYYNQSGPLMPPLCYPYDSNLQDRQCGSIEVSMENASVVWKNYVCT 424

Query: 164 TSSSGFCTTAGRITPDFYTQLVAAVN 241
            S  G C   GR+T D YTQLVAAVN
Sbjct: 425 KSELGLCNNEGRVTQDTYTQLVAAVN 450


>emb|CBI26928.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 8/86 (9%)
 Frame = +2

Query: 8   IYSYANTDPSPRAINYCNQSGLLIPPLCSPFDSELNDRQCGPQE--------VWQNYTCV 163
           IY+YAN +PSP  +NY NQSG L+PPLC P+DS L DRQCG  E        VW+NY C 
Sbjct: 487 IYTYANANPSPTDLNYYNQSGPLMPPLCYPYDSNLQDRQCGSIEVSMENASVVWKNYVCT 546

Query: 164 TSSSGFCTTAGRITPDFYTQLVAAVN 241
            S  G C   GR+T D YTQLVAAVN
Sbjct: 547 KSELGLCNNEGRVTQDTYTQLVAAVN 572


>ref|XP_002887346.1| hypothetical protein ARALYDRAFT_476243 [Arabidopsis lyrata subsp.
           lyrata] gi|297333187|gb|EFH63605.1| hypothetical protein
           ARALYDRAFT_476243 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
 Frame = +2

Query: 2   TAIYSYANTDPSPRAINYCNQSGLLIPPLCSPFDSELNDRQCGPQE--------VWQNYT 157
           T +Y+ ANT+PSP    Y NQSG  +PPLC PFD+ + DRQC P E        VW+NY 
Sbjct: 364 TFVYAVANTNPSPGQDRYYNQSGPPMPPLCIPFDANMEDRQCSPWELSIENASSVWENYQ 423

Query: 158 CVTSSSGFCTTAGRITPDFYTQLVAAVN 241
           C  + SG CTT GR+TPD + QLVAAVN
Sbjct: 424 CEVTQSGVCTTVGRVTPDTFGQLVAAVN 451


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