BLASTX nr result

ID: Coptis23_contig00035821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035821
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   172   3e-41
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   172   3e-41
ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41
ref|XP_004140923.1| PREDICTED: transcription factor GAMYB-like [...   169   2e-40
dbj|BAD68205.1| putative transcription factor GAMyb [Oryza sativ...   169   2e-40

>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/86 (90%), Positives = 83/86 (96%)
 Frame = +3

Query: 3   GGSGLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLYRCGKSCRLRWANHLRPNLKK 182
           GG  LKKGPWTS+EDAILV+YV+KHGEGNWNAVQKHSGL+RCGKSCRLRWANHLRPNLKK
Sbjct: 34  GGIVLKKGPWTSSEDAILVEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKK 93

Query: 183 GAFTSEEEHLIIELHAKMGNKWARMA 260
           GAFT+EEE LIIELHAKMGNKWARMA
Sbjct: 94  GAFTAEEERLIIELHAKMGNKWARMA 119


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  172 bits (435), Expect = 3e-41
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = +3

Query: 3   GGSGLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLYRCGKSCRLRWANHLRPNLKK 182
           GG+ LKKGPWTSAEDAIL++YV+KHGEGNWNAVQKHSGL RCGKSCRLRWANHLRPNLKK
Sbjct: 34  GGAMLKKGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKK 93

Query: 183 GAFTSEEEHLIIELHAKMGNKWARMA 260
           GAFT EEE LIIELHAKMGNKWARMA
Sbjct: 94  GAFTQEEEQLIIELHAKMGNKWARMA 119


>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +3

Query: 6   GSGLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLYRCGKSCRLRWANHLRPNLKKG 185
           G  LKKGPWTSAEDAIL++YV+KHGEGNWNAVQKHSGL+RCGKSCRLRWANHLRPNLKKG
Sbjct: 34  GGVLKKGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKG 93

Query: 186 AFTSEEEHLIIELHAKMGNKWARMA 260
           AFT EEE LIIELHAKMGNKWARMA
Sbjct: 94  AFTQEEEQLIIELHAKMGNKWARMA 118


>ref|XP_004140923.1| PREDICTED: transcription factor GAMYB-like [Cucumis sativus]
           gi|449520631|ref|XP_004167337.1| PREDICTED:
           transcription factor GAMYB-like [Cucumis sativus]
          Length = 552

 Score =  169 bits (429), Expect = 2e-40
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +3

Query: 15  LKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLYRCGKSCRLRWANHLRPNLKKGAFT 194
           LKKGPWTSAED IL++YV+KHGEGNWNAVQKHSGL RCGKSCRLRWANHLRPNLKKGAFT
Sbjct: 36  LKKGPWTSAEDEILIEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFT 95

Query: 195 SEEEHLIIELHAKMGNKWARMA 260
           +EEEHLIIELHAKMGNKWARMA
Sbjct: 96  AEEEHLIIELHAKMGNKWARMA 117


>dbj|BAD68205.1| putative transcription factor GAMyb [Oryza sativa Japonica Group]
           gi|215686678|dbj|BAG88931.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 474

 Score =  169 bits (429), Expect = 2e-40
 Identities = 76/86 (88%), Positives = 83/86 (96%)
 Frame = +3

Query: 3   GGSGLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLYRCGKSCRLRWANHLRPNLKK 182
           GG  LKKGPWTSAEDAILVDYV+KHGEGNWNAVQK++GL+RCGKSCRLRWANHLRPNLKK
Sbjct: 36  GGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKK 95

Query: 183 GAFTSEEEHLIIELHAKMGNKWARMA 260
           GAFT+EEE LII+LH+KMGNKWARMA
Sbjct: 96  GAFTAEEERLIIQLHSKMGNKWARMA 121


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