BLASTX nr result

ID: Coptis23_contig00035819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035819
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis...    60   2e-07
emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]    60   2e-07
ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003591411.1| Hybrid signal transduction histidine kinase ...    57   2e-06
ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glyci...    56   3e-06

>ref|XP_002270319.1| PREDICTED: histidine kinase CKI1-like [Vitis vinifera]
          Length = 1110

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41   FSELNSILESFQKDICDSRCRVVWLCTPET-NVEARRLDEKKLAKCELIVSKPLHGSRLF 217
            F EL   +  F+KD+ ++ CR VWL  P   +V  R + E+ ++  +L++ KP HGSRL+
Sbjct: 845  FPELCRAVAEFRKDLQNTCCRAVWLDKPTLRSVNFRDVPEEMISPNDLVMLKPFHGSRLY 904

Query: 218  QLLKLLPEF 244
            Q+ KLLPEF
Sbjct: 905  QVAKLLPEF 913


>emb|CAN78916.1| hypothetical protein VITISV_032223 [Vitis vinifera]
          Length = 1143

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41   FSELNSILESFQKDICDSRCRVVWLCTPET-NVEARRLDEKKLAKCELIVSKPLHGSRLF 217
            F EL   +  F+KD+ ++ CR VWL  P   +V  R + E+ ++  +L++ KP HGSRL+
Sbjct: 878  FPELCRAVAEFRKDLQNTCCRAVWLDKPTLRSVNFRDVPEEMISPNDLVMLKPFHGSRLY 937

Query: 218  QLLKLLPEF 244
            Q+ KLLPEF
Sbjct: 938  QVAKLLPEF 946


>ref|XP_002320976.1| predicted protein [Populus trichocarpa] gi|222861749|gb|EEE99291.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41   FSELNSILESFQKDICDSRCRVVWLCTPET-NVEARRLDEKKLAKCELIVSKPLHGSRLF 217
            F EL  ++  F++D+  S C+VVWL  P + ++  R  ++  +   + I+ KP HGSRL+
Sbjct: 833  FQELCRVVAEFKRDLHSSCCKVVWLDKPTSRSINLRSFEQDLIDPRDDILLKPFHGSRLY 892

Query: 218  QLLKLLPEF 244
            Q+++LLPEF
Sbjct: 893  QVIRLLPEF 901


>ref|XP_003591411.1| Hybrid signal transduction histidine kinase I [Medicago truncatula]
           gi|355480459|gb|AES61662.1| Hybrid signal transduction
           histidine kinase I [Medicago truncatula]
          Length = 486

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41  FSELNSILESFQKDICDSRCRVVWLCTP-ETNVEARRLDEKKLAKCELIVSKPLHGSRLF 217
           FS+L  I+ +F+KD+ +   +VVWL  P E++V+ + +D+      + ++SKP HGSRLF
Sbjct: 224 FSKLCKIVSNFKKDLLNPS-KVVWLEKPFESSVDYQAIDQD-----DNVISKPFHGSRLF 277

Query: 218 QLLKLLPEF 244
           Q++KLLPEF
Sbjct: 278 QVIKLLPEF 286


>ref|XP_003520750.1| PREDICTED: histidine kinase CKI1-like [Glycine max]
          Length = 1056

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41  FSELNSILESFQKDICDSRCRVVWLCTPET-NVEARRLDEKKLAKCELIVSKPLHGSRLF 217
           FSEL  ++  F++ +C   CRVVWL  P   +V+ + L++      ++++SKPLHG RLF
Sbjct: 786 FSELCKVVAEFKRGLCYP-CRVVWLENPLIPSVDNKILNKDVSNSNDIVLSKPLHGHRLF 844

Query: 218 QLLKLLPEF 244
           Q++++LPE+
Sbjct: 845 QVIRILPEY 853


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