BLASTX nr result

ID: Coptis23_contig00035810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035810
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60022.1| hypothetical protein VITISV_007671 [Vitis vinifera]    44   9e-08
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    44   1e-07
emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]    44   1e-07
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]    44   1e-07
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    44   3e-07

>emb|CAN60022.1| hypothetical protein VITISV_007671 [Vitis vinifera]
          Length = 1610

 Score = 43.9 bits (102), Expect(2) = 9e-08
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +3

Query: 162  MSLFYMPSTVVNRLESIMRDFLWDDNDDRHRFHLVR 269
            MSLF +P  V  RLE I R+FLW D ++R + HLVR
Sbjct: 1472 MSLFVIPRKVRLRLEKIQREFLWGDFEERRKIHLVR 1507



 Score = 37.0 bits (84), Expect(2) = 9e-08
 Identities = 18/41 (43%), Positives = 29/41 (70%)
 Frame = +2

Query: 50   ILIERFSRRLSG*KGRLLSTGDRVILIKSIFSSLPV*YVSI 172
            ++ ERF R+L+  K + LS G R+ LIKS  S+LP+ ++S+
Sbjct: 1434 VVEERFKRKLATWKKQYLSKGGRLTLIKSTLSNLPIYFMSL 1474


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +3

Query: 162 MSLFYMPSTVVNRLESIMRDFLWDDNDDRHRFHLVR 269
           MSLF +P  V  RLE I R+FLW D ++R + HLVR
Sbjct: 794 MSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVR 829



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +2

Query: 59  ERFSRRLSG*KGRLLSTGDRVILIKSIFSSLPV*YVSI 172
           ERF R+L+  K + LS G R+ LIKS  S+LP+ ++S+
Sbjct: 759 ERFKRKLAMWKKQYLSKGGRLTLIKSTLSNLPIYFMSL 796


>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = +3

Query: 162 MSLFYMPSTVVNRLESIMRDFLWDDNDDRHRFHLVR 269
           MSLF +P  V  RLE I R+FLW D ++R + HLVR
Sbjct: 497 MSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVR 532



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +2

Query: 59  ERFSRRLSG*KGRLLSTGDRVILIKSIFSSLPV*YVSI 172
           ERF R+L+  K + LS G R+ LIKS  S+LP+ ++S+
Sbjct: 462 ERFKRKLAMWKKQYLSKGGRLTLIKSTLSNLPIYFMSL 499


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = +3

Query: 162 MSLFYMPSTVVNRLESIMRDFLWDDNDDRHRFHLVR 269
           MSLF +P  V  RLE I R+FLW D + R R HLVR
Sbjct: 102 MSLFVIPRKVRIRLEKIQREFLWGDVEGRRRIHLVR 137



 Score = 36.6 bits (83), Expect(2) = 1e-07
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +2

Query: 59  ERFSRRLSG*KGRLLSTGDRVILIKSIFSSLPV*YVSI 172
           ERF R+L+  K + LS G R+ LIKS  S+LP+ ++S+
Sbjct: 67  ERFKRKLATWKKQYLSKGGRLTLIKSTLSNLPIYFMSL 104


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = +3

Query: 162 MSLFYMPSTVVNRLESIMRDFLWDDNDDRHRFHLVR 269
           MSLF +P  V  RLE I R+FLW D + R R HLVR
Sbjct: 444 MSLFVLPRKVRIRLEKIQREFLWGDVEGRRRIHLVR 479



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +2

Query: 59  ERFSRRLSG*KGRLLSTGDRVILIKSIFSSLPV*YVSI 172
           ERF R+L+  K + L  G R+ LIKS  S+LP+ ++S+
Sbjct: 409 ERFKRKLATWKKQYLPKGGRLTLIKSTLSNLPIYFMSL 446


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