BLASTX nr result
ID: Coptis23_contig00035800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00035800
(634 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25042.3| unnamed protein product [Vitis vinifera] 202 3e-52
ref|XP_002307608.1| predicted protein [Populus trichocarpa] gi|2... 188 7e-49
ref|XP_003520202.1| PREDICTED: uncharacterized protein LOC100781... 171 5e-45
gb|EEC68431.1| hypothetical protein OsI_36621 [Oryza sativa Indi... 170 1e-44
gb|EEE52353.1| hypothetical protein OsJ_34401 [Oryza sativa Japo... 169 3e-44
>emb|CBI25042.3| unnamed protein product [Vitis vinifera]
Length = 1069
Score = 202 bits (513), Expect(2) = 3e-52
Identities = 92/120 (76%), Positives = 106/120 (88%)
Frame = +3
Query: 63 ELSARTRTLLDQHLDGWNEDVKDLAYKLRSLMEMCILIPGISSKRLQRGVTGGHGGISPA 242
+++A TR LLDQHL GWNE++K+LAYKLRS MEMCILIPG SSK L G+T G GG+SPA
Sbjct: 949 QINALTRALLDQHLKGWNEELKELAYKLRSFMEMCILIPGSSSKHLHLGLTKGRGGVSPA 1008
Query: 243 SWKCSEEFFSDQIRSRDPLKQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYFQPPPQ 422
SWKCSEEFFS QI+SRDPLK GFP +WALRLVRQLL+WDP++RLSVDDALQHPYFQ PP+
Sbjct: 1009 SWKCSEEFFSHQIKSRDPLKLGFPNVWALRLVRQLLLWDPDERLSVDDALQHPYFQHPPK 1068
Score = 29.3 bits (64), Expect(2) = 3e-52
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 1 YTPPEALLNTKWFEGPRSIVL 63
Y PPEA LN W++G S L
Sbjct: 906 YAPPEAFLNASWYKGLTSTTL 926
>ref|XP_002307608.1| predicted protein [Populus trichocarpa] gi|222857057|gb|EEE94604.1|
predicted protein [Populus trichocarpa]
Length = 409
Score = 188 bits (477), Expect(2) = 7e-49
Identities = 88/120 (73%), Positives = 104/120 (86%)
Frame = +3
Query: 63 ELSARTRTLLDQHLDGWNEDVKDLAYKLRSLMEMCILIPGISSKRLQRGVTGGHGGISPA 242
++SART+ LLD H+ GWNED+K+LAYKLR+ ME+CILIPG SSK + + G G SPA
Sbjct: 292 QISARTQALLDPHIVGWNEDLKELAYKLRAFMELCILIPGSSSKHHR---STGRVGDSPA 348
Query: 243 SWKCSEEFFSDQIRSRDPLKQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYFQPPPQ 422
SWKCSEEFFS+QI++RDPLK GFP +WALRLVRQLL+WDPEDRLSVDDALQHPYFQPPP+
Sbjct: 349 SWKCSEEFFSNQIKNRDPLKIGFPNVWALRLVRQLLLWDPEDRLSVDDALQHPYFQPPPK 408
Score = 32.0 bits (71), Expect(2) = 7e-49
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 1 YTPPEALLNTKWFEGPRS 54
Y+PPEA LN W+ GP S
Sbjct: 249 YSPPEAFLNASWYHGPTS 266
>ref|XP_003520202.1| PREDICTED: uncharacterized protein LOC100781476 [Glycine max]
Length = 1135
Score = 171 bits (432), Expect(2) = 5e-45
Identities = 85/125 (68%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Frame = +3
Query: 63 ELSARTRTLLDQHLDGWNEDVKDLAYKLRSLMEMCILIPGIS-----SKRLQRGVTGGHG 227
+++A TR LLD+ L+GWNE VK+LAYKLRS ME+CILIPGIS SK+ Q+
Sbjct: 1016 QINALTRALLDRQLEGWNEGVKELAYKLRSFMELCILIPGISRSSSSSKKYQKV------ 1069
Query: 228 GISPASWKCSEEFFSDQIRSRDPLKQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYF 407
G+SPASWKCSEEFFS QIR+RDPLK GF IWALRLVR LL WDPEDR S+D+ALQHPYF
Sbjct: 1070 GVSPASWKCSEEFFSRQIRNRDPLKIGFSNIWALRLVRHLLHWDPEDRPSIDEALQHPYF 1129
Query: 408 QPPPQ 422
Q PP+
Sbjct: 1130 QHPPR 1134
Score = 36.2 bits (82), Expect(2) = 5e-45
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 1 YTPPEALLNTKWFEGPRSIVL 63
YTPPEALLN W++GP S L
Sbjct: 973 YTPPEALLNATWYQGPTSSTL 993
>gb|EEC68431.1| hypothetical protein OsI_36621 [Oryza sativa Indica Group]
Length = 1133
Score = 170 bits (431), Expect(2) = 1e-44
Identities = 79/122 (64%), Positives = 93/122 (76%)
Frame = +3
Query: 54 HSSELSARTRTLLDQHLDGWNEDVKDLAYKLRSLMEMCILIPGISSKRLQRGVTGGHGGI 233
H ++S RTR L+D L+GW+E K+LAYKLRS ME+CIL+PGISS+ G HG
Sbjct: 1013 HVFQISDRTRALMDHRLEGWSEQTKELAYKLRSYMELCILVPGISSQHQGSG-DSEHGQF 1071
Query: 234 SPASWKCSEEFFSDQIRSRDPLKQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYFQP 413
PASWKCSEE F+ Q++ RDPLK GFP IWALRL RQLL+W PEDRLSVD+AL HPYFQ
Sbjct: 1072 RPASWKCSEESFAHQVKIRDPLKMGFPNIWALRLARQLLIWHPEDRLSVDEALAHPYFQE 1131
Query: 414 PP 419
PP
Sbjct: 1132 PP 1133
Score = 35.4 bits (80), Expect(2) = 1e-44
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 1 YTPPEALLNTKWFEGPRS 54
YTPPEALLN+ WF+G +S
Sbjct: 973 YTPPEALLNSSWFQGSKS 990
Score = 135 bits (341), Expect = 5e-30
Identities = 65/100 (65%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 123 VKDLAYK-LRSLMEMCILIPGISSKRLQRGVTGGHGGISPASWKCSEEFFSDQIRSRDPL 299
+ D+ YK LRS ME+CIL+PGISS+ G HG PASWKCSEE F+ Q++ RDPL
Sbjct: 315 IGDVPYKRLRSYMELCILVPGISSQHQGSG-DSEHGQFRPASWKCSEESFAHQVKIRDPL 373
Query: 300 KQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYFQPPP 419
K GFP IWALRL RQLL+W PEDRLSVD+ L HPYFQ PP
Sbjct: 374 KMGFPNIWALRLARQLLIWHPEDRLSVDEVLAHPYFQEPP 413
>gb|EEE52353.1| hypothetical protein OsJ_34401 [Oryza sativa Japonica Group]
Length = 1038
Score = 169 bits (427), Expect(2) = 3e-44
Identities = 78/122 (63%), Positives = 92/122 (75%)
Frame = +3
Query: 54 HSSELSARTRTLLDQHLDGWNEDVKDLAYKLRSLMEMCILIPGISSKRLQRGVTGGHGGI 233
H ++S RTR L+D L+GW+E K+LAYKLRS ME+CIL+PGISS+ G HG
Sbjct: 918 HVFQISDRTRALMDHRLEGWSEQTKELAYKLRSYMELCILVPGISSQHQGSG-DSEHGQF 976
Query: 234 SPASWKCSEEFFSDQIRSRDPLKQGFPTIWALRLVRQLLVWDPEDRLSVDDALQHPYFQP 413
PASWKCSEE F+ Q++ RDPLK GFP IWALRL RQLL+W PEDRLSVD+ L HPYFQ
Sbjct: 977 RPASWKCSEESFAHQVKIRDPLKMGFPNIWALRLARQLLIWHPEDRLSVDEVLAHPYFQE 1036
Query: 414 PP 419
PP
Sbjct: 1037 PP 1038
Score = 35.4 bits (80), Expect(2) = 3e-44
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 1 YTPPEALLNTKWFEGPRS 54
YTPPEALLN+ WF+G +S
Sbjct: 878 YTPPEALLNSSWFQGSKS 895