BLASTX nr result

ID: Coptis23_contig00035797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035797
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    98   7e-19
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    97   1e-18
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 468 MDYQRSVLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATAKRKRLSFARVCV 289
           M + +  L  VPVWV+L+++P E WT+ GLS  AS +  P+  D  T  RKRLS+ARVCV
Sbjct: 230 MQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCV 289

Query: 288 EVPVNHKYEPTVRLKV-KGREVAVGVEYTWKPSSCEKCNKFGHSTSRCGARTV 133
           E+  +        L+   G  + +  EY W PS C  CN FGH+T+ C    +
Sbjct: 290 EIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 468 MDYQRSVLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATAKRKRLSFARVCV 289
           M + +  L  VPVWV+L+++P E WT+ GLS  AS +  P+  D  T  RKRLS+ARVCV
Sbjct: 230 MQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCV 289

Query: 288 EVPVNHKYEPTVRLKV-KGREVAVGVEYTWKPSSCEKCNKFGHSTSRCGARTV 133
           E+  +        L+   G  + +  EY W PS C  CN FGH+T+ C    +
Sbjct: 290 EIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 468  MDYQRSVLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATAKRKRLSFARVCV 289
            M + +  L  VPVWV+L+++P E WT+ GLS  AS +  P+  D  T  RKRLS+ARVCV
Sbjct: 1023 MQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCV 1082

Query: 288  EVPVNHKYEPTVRLKV-KGREVAVGVEYTWKPSSCEKCNKFGHSTSRCGARTV 133
            E+  +        L+   G  + +  EY W PS C  CN FGH+T+ C    +
Sbjct: 1083 EIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 1135


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
 Frame = -3

Query: 468 MDYQRSVLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATAKRKRLSFARVCV 289
           M + +     VPVWV+L+++P E WT+ GLS  AS I  P+  D  T  RKRLS+ARVCV
Sbjct: 230 MQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCV 289

Query: 288 EVPVNHKYEPTVRLKV-KGREVAVGVEYTWKPSSCEKCNKFGHSTSRCGARTV 133
           E+  +        L+   G  + +  EY W PS C  CN FGH+T+ C    +
Sbjct: 290 EIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/101 (45%), Positives = 62/101 (61%)
 Frame = -3

Query: 450 VLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATAKRKRLSFARVCVEVPVNH 271
           V  +VPVW+KL  +P E+WT  GL   AS I  P+ +D AT +R RLS+AR+CVE+ V+ 
Sbjct: 47  VFDSVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDS 106

Query: 270 KYEPTVRLKVKGREVAVGVEYTWKPSSCEKCNKFGHSTSRC 148
                + + ++G E  V V Y WKP  C  C+ FGHS S C
Sbjct: 107 TMPIEITVNLRGEEFIVPVTYEWKPRKCNLCHSFGHSQSTC 147


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
 Frame = -3

Query: 504 NCMTFLKKCGLWMDYQRSVLTTVPVWVKLHDLPKEMWTLDGLSYTASLIAGPMFMDDATA 325
           N    LK+    M + +  L  VPVWV L+++P E WT+ GLS  AS I  P+  D  T 
Sbjct: 218 NMPLVLKRWQPNMQFLKDDLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTF 277

Query: 324 KRKRLSFARVCVEVPVNHKYEPTVRLKV-KGREVAVGVEYTWKPSSCEKCNKFGHSTSRC 148
            RKRLS+ARVCVE+  +        L+   G  + +  EY W PS C  CN FGH+ + C
Sbjct: 278 LRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTRTLC 337

Query: 147 GARTVRRWNARNMVRGETSGPTSLETNVEGIENQ 46
               +   N + +  G+ +       + +  +NQ
Sbjct: 338 ATNNIN--NLKVVAEGKRNLGAMNSKSADNKQNQ 369


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