BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035788
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
emb|CBI40500.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   111   5e-23
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Glycine max]
          Length = 911

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/81 (66%), Positives = 63/81 (77%)
 Frame = -3

Query: 244  DVENLKDLMGTVGLKSRLGWSWIQIEQSIHVFSAEGKVHSDIGEIYFHLYQFISEMRKLG 65
            DVE LK+ M  +G+K    WSWIQ+ Q+IHVFS EGK H + GEIYF LYQ ISE++KLG
Sbjct: 760  DVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLG 819

Query: 64   YVPDTSCVFQNISDEEKEKVL 2
            YVPDT+CV QNI D EKEKVL
Sbjct: 820  YVPDTNCVHQNIDDSEKEKVL 840


>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/81 (56%), Positives = 66/81 (81%)
 Frame = -3

Query: 244  DVENLKDLMGTVGLKSRLGWSWIQIEQSIHVFSAEGKVHSDIGEIYFHLYQFISEMRKLG 65
            D+++L++LMG  G+++R  WSWIQI Q +HVFS++ K H D G+IYF LYQ +SEM+KLG
Sbjct: 982  DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1041

Query: 64   YVPDTSCVFQNISDEEKEKVL 2
            YVPD +CV+QN+ + EK+K+L
Sbjct: 1042 YVPDVNCVYQNMDEVEKQKIL 1062


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
            mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/81 (56%), Positives = 66/81 (81%)
 Frame = -3

Query: 244  DVENLKDLMGTVGLKSRLGWSWIQIEQSIHVFSAEGKVHSDIGEIYFHLYQFISEMRKLG 65
            D+++L++LMG  G+++R  WSWIQI Q +HVFS++ K H D G+IYF LYQ +SEM+KLG
Sbjct: 762  DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 821

Query: 64   YVPDTSCVFQNISDEEKEKVL 2
            YVPD +CV+QN+ + EK+K+L
Sbjct: 822  YVPDVNCVYQNMDEVEKQKIL 842


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/81 (56%), Positives = 66/81 (81%)
 Frame = -3

Query: 244  DVENLKDLMGTVGLKSRLGWSWIQIEQSIHVFSAEGKVHSDIGEIYFHLYQFISEMRKLG 65
            D+++L++LMG  G+++R  WSWIQI Q +HVFS++ K H D G+IYF LYQ +SEM+KLG
Sbjct: 1257 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1316

Query: 64   YVPDTSCVFQNISDEEKEKVL 2
            YVPD +CV+QN+ + EK+K+L
Sbjct: 1317 YVPDVNCVYQNMDEVEKQKIL 1337


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -3

Query: 244 DVENLKDLMGTVGLKSRLGWSWIQIEQSIHVFSAEGKVHSDIGEIYFHLYQFISEMRKLG 65
           DV+ +KDLM T G+K R  WSWIQI+Q +H+FSA G  H D GEIY+ LYQ +SE++K G
Sbjct: 348 DVDRIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFG 407

Query: 64  YVPDTSCVFQNISDEEKEKVL 2
           Y+PD +CV+QNI +EEK K+L
Sbjct: 408 YLPDVNCVYQNIDEEEKVKML 428