BLASTX nr result

ID: Coptis23_contig00035783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035783
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...    84   9e-15
ref|XP_004147749.1| PREDICTED: uncharacterized protein LOC101215...    82   5e-14
ref|XP_002530206.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002892352.1| hypothetical protein ARALYDRAFT_887868 [Arab...    69   5e-10
ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
 Frame = -2

Query: 309 DLGFILTSLKGLMGCFLGCFRVKDDKKPQFHR--ISDVNYSKDGDWMSGDN-MATLFLSQ 139
           +LGF+    +  MGCF GCFR+KDD +   HR   S V+ SK  + M   N ++ LFL++
Sbjct: 9   ELGFVSRFARA-MGCFFGCFRIKDDHQ---HRPNASFVSQSKSTETMISQNRLSALFLAE 64

Query: 138 ET-DSCSSDHRSTEFPFRDIDG--KALKDEAKFLKACGTLLETPAEIRK 1
           E  DS S D +S  F   + +   K LKDEA+FLKACGTL+ETPAEIRK
Sbjct: 65  EKEDSLSKDRKSHVFGSSEPENIDKELKDEARFLKACGTLVETPAEIRK 113


>ref|XP_004147749.1| PREDICTED: uncharacterized protein LOC101215061 [Cucumis sativus]
           gi|449502138|ref|XP_004161553.1| PREDICTED:
           uncharacterized protein LOC101223561 [Cucumis sativus]
          Length = 448

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = -2

Query: 306 LGFILTSLKGLMGCFLGCFRVKDDK-KPQFHRISDVNYSKDGDWMSGDN-MATLFLSQET 133
           +GF+  S+   MGCF  CF+V+DD+ +P+ H +SD   SK G+ +   N +++LFLS+E 
Sbjct: 17  VGFLDRSVSRAMGCFFDCFKVRDDRHRPRSHLLSDPPCSKYGEPVVARNQLSSLFLSEEN 76

Query: 132 -DSCSSDHRSTEFPFRDIDGKALKDEAKFLKACGTLLETPAEIRK 1
            DS   D  S  F       K L DEAKFLKACG ++ETPAEIRK
Sbjct: 77  EDSPKKDSGSKSFGSPRYT-KELMDEAKFLKACGAIVETPAEIRK 120


>ref|XP_002530206.1| conserved hypothetical protein [Ricinus communis]
           gi|223530282|gb|EEF32180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
 Frame = -2

Query: 273 MGCFLGCFRVKDD--KKPQFHRISDVNYS-KDGDWMSGDNMATLFLSQETDSCSSDHRST 103
           MGCF GCFR++DD  ++P    +SD   S   G  +S + +++LFL++E +    + R +
Sbjct: 1   MGCFFGCFRIRDDHHRRPPNLVVSDSTRSLPPGAVVSKNRLSSLFLTEEREDLEWNKRKS 60

Query: 102 EFPFRDIDGKALKDEAKFLKACGTLLETPAEIRK 1
           +        K L +EAKFLKACGTL ETP+EIRK
Sbjct: 61  DCFGSPQINKELANEAKFLKACGTLPETPSEIRK 94


>ref|XP_002892352.1| hypothetical protein ARALYDRAFT_887868 [Arabidopsis lyrata subsp.
           lyrata] gi|297338194|gb|EFH68611.1| hypothetical protein
           ARALYDRAFT_887868 [Arabidopsis lyrata subsp. lyrata]
          Length = 486

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
 Frame = -2

Query: 306 LGFILTSLKGLMGCFLGCFRVKDDKKPQ--FHRISDVNYSKDGDWMSGDNMATLFLSQET 133
           L FI  S+   M CFL CFR +D++         S  N  K  D  S ++++ LFLS+E 
Sbjct: 18  LRFIDLSVCRAMACFLDCFRARDNRSTSNLVSHSSLANPRKRQD--SQNDLSALFLSEEK 75

Query: 132 DSCSSDHRSTEFPFRDID-GKALKDEAKFLKACGTLLETPAEIRK 1
            + S  H    F    I   K L+DEA+FLKACGT+ ETP EIRK
Sbjct: 76  AASSPCHDKERFDLDSIHIDKGLRDEARFLKACGTIPETPIEIRK 120


>ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|222842591|gb|EEE80138.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
 Frame = -2

Query: 306 LGFILTSLKGLMGCFLGCFRVKDDKKPQFHRISDVNYSKDGDWMSGDNMATLFLSQETDS 127
           L F+  S    MGCF  CFR KDD+          N  K    +  + +++LFLS+E + 
Sbjct: 18  LRFLFRSFLRAMGCFFTCFRTKDDRS---------NRGKQEAGVLKNRLSSLFLSEEKE- 67

Query: 126 CSSDHRSTEFPFRDIDG---------KALKDEAKFLKACGTLLETPAEIRK 1
                   E P  DI+          K L+DEAKFLKACGTL ETP EIRK
Sbjct: 68  --------ESPRGDIENPCLGSPQINKGLRDEAKFLKACGTLPETPTEIRK 110


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