BLASTX nr result

ID: Coptis23_contig00035779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035779
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522728.1| DNA binding protein, putative [Ricinus commu...   139   2e-31
ref|XP_002866105.1| hypothetical protein ARALYDRAFT_495647 [Arab...   138   5e-31
dbj|BAF00788.1| hypothetical protein [Arabidopsis thaliana]           137   1e-30
ref|NP_200371.2| agenet domain-containing protein / bromo-adjace...   137   1e-30
ref|XP_004150298.1| PREDICTED: uncharacterized protein LOC101209...   136   2e-30

>ref|XP_002522728.1| DNA binding protein, putative [Ricinus communis]
           gi|223537966|gb|EEF39579.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 683

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/99 (68%), Positives = 81/99 (81%)
 Frame = +2

Query: 128 FLEWKEVFVSQEKGNRLVHYFFKDTSGNSILAVVGTERSLRHMVYVVSDEFVQLYGSQKS 307
           F+EWKE FVSQE+GNR+VHYF KD++G SILAVVGTERS+RHM YVV++EFVQ YG++ S
Sbjct: 8   FVEWKEQFVSQERGNRVVHYFLKDSAGESILAVVGTERSVRHMFYVVAEEFVQAYGTEHS 67

Query: 308 ITSSFKWRSKREVVDWLTSSLLKQRHSSRDFSMSPRKSL 424
           I + FKWRS+REVVDWLTS L KQ H   D S SP+  L
Sbjct: 68  IHAGFKWRSRREVVDWLTSMLSKQ-HLQGDRSKSPKHDL 105


>ref|XP_002866105.1| hypothetical protein ARALYDRAFT_495647 [Arabidopsis lyrata subsp.
           lyrata] gi|297311940|gb|EFH42364.1| hypothetical protein
           ARALYDRAFT_495647 [Arabidopsis lyrata subsp. lyrata]
          Length = 664

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/107 (64%), Positives = 88/107 (82%), Gaps = 4/107 (3%)
 Frame = +2

Query: 128 FLEWKEVFVSQEKGNRLVHYFFKDTSGNSILAVVGTERSLRHMVYVVSDEFVQLYGSQKS 307
           F+EWKE FVSQE+GNR+VHYF KD++G SILAVVGTERS+RHM YVVS+EFV+++GS+ S
Sbjct: 8   FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVVGTERSVRHMFYVVSEEFVRIHGSENS 67

Query: 308 ITSSFKWRSKREVVDWLTSSLLKQRHSSRDFSMSPR----KSLGSPD 436
           I + FKWRS+REVVDWLTS L KQ  +  ++S SP+    +S GSP+
Sbjct: 68  IHAGFKWRSRREVVDWLTSMLSKQ-STQGNWSKSPKCESGESNGSPE 113


>dbj|BAF00788.1| hypothetical protein [Arabidopsis thaliana]
          Length = 663

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/107 (63%), Positives = 87/107 (81%), Gaps = 4/107 (3%)
 Frame = +2

Query: 128 FLEWKEVFVSQEKGNRLVHYFFKDTSGNSILAVVGTERSLRHMVYVVSDEFVQLYGSQKS 307
           F+EWKE FVSQE+GNR+VHYF KD++G SILAV+GTERS+RHM YVVS+EFV+++G + S
Sbjct: 8   FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENS 67

Query: 308 ITSSFKWRSKREVVDWLTSSLLKQRHSSRDFSMSPR----KSLGSPD 436
           I S FKWRS+REVVDWLTS L KQ  +  ++S SP+    +S GSP+
Sbjct: 68  IHSGFKWRSRREVVDWLTSMLSKQ-STQGNWSKSPKCESGESNGSPE 113


>ref|NP_200371.2| agenet domain-containing protein / bromo-adjacent homology (BAH)
           domain-containing protein [Arabidopsis thaliana]
           gi|186532338|ref|NP_001119443.1| agenet
           domain-containing protein / bromo-adjacent homology
           (BAH) domain-containing protein [Arabidopsis thaliana]
           gi|334188428|ref|NP_001190547.1| agenet
           domain-containing protein / bromo-adjacent homology
           (BAH) domain-containing protein [Arabidopsis thaliana]
           gi|18087548|gb|AAL58906.1|AF462815_1 AT5g55600/MDF20_4
           [Arabidopsis thaliana] gi|24111271|gb|AAN46759.1|
           At5g55600/MDF20_4 [Arabidopsis thaliana]
           gi|332009271|gb|AED96654.1| agenet domain-containing
           protein / bromo-adjacent homology (BAH)
           domain-containing protein [Arabidopsis thaliana]
           gi|332009272|gb|AED96655.1| agenet domain-containing
           protein / bromo-adjacent homology (BAH)
           domain-containing protein [Arabidopsis thaliana]
           gi|332009273|gb|AED96656.1| agenet domain-containing
           protein / bromo-adjacent homology (BAH)
           domain-containing protein [Arabidopsis thaliana]
          Length = 663

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/107 (63%), Positives = 87/107 (81%), Gaps = 4/107 (3%)
 Frame = +2

Query: 128 FLEWKEVFVSQEKGNRLVHYFFKDTSGNSILAVVGTERSLRHMVYVVSDEFVQLYGSQKS 307
           F+EWKE FVSQE+GNR+VHYF KD++G SILAV+GTERS+RHM YVVS+EFV+++G + S
Sbjct: 8   FVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENS 67

Query: 308 ITSSFKWRSKREVVDWLTSSLLKQRHSSRDFSMSPR----KSLGSPD 436
           I S FKWRS+REVVDWLTS L KQ  +  ++S SP+    +S GSP+
Sbjct: 68  IHSGFKWRSRREVVDWLTSMLSKQ-STQGNWSKSPKCESGESNGSPE 113


>ref|XP_004150298.1| PREDICTED: uncharacterized protein LOC101209069 [Cucumis sativus]
          Length = 701

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/94 (69%), Positives = 79/94 (84%)
 Frame = +2

Query: 122 NGFLEWKEVFVSQEKGNRLVHYFFKDTSGNSILAVVGTERSLRHMVYVVSDEFVQLYGSQ 301
           N F+EWKE FVSQE+GNR+VHYF KD++G SILAVVGTERS+RHM YVV+DEF++ +G +
Sbjct: 12  NYFMEWKEQFVSQERGNRVVHYFLKDSAGESILAVVGTERSVRHMFYVVADEFLRAHGKE 71

Query: 302 KSITSSFKWRSKREVVDWLTSSLLKQRHSSRDFS 403
            S+ + FKWRS+REVVDWLTS L KQ HSS D S
Sbjct: 72  SSVHAGFKWRSRREVVDWLTSMLSKQ-HSSGDHS 104


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