BLASTX nr result

ID: Coptis23_contig00035769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035769
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28962.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002274324.1| PREDICTED: histone-lysine N-methyltransferas...   120   9e-26
ref|XP_003540318.1| PREDICTED: histone-lysine N-methyltransferas...   113   1e-23
ref|XP_003597027.1| Histone-lysine N-methyltransferase ATXR2 [Me...   112   2e-23
ref|XP_002327842.1| SET domain protein [Populus trichocarpa] gi|...   112   3e-23

>emb|CBI28962.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/108 (54%), Positives = 71/108 (65%)
 Frame = -2

Query: 332 GRNLYLYDLGLSGRMDCXXXXXXXXXDLFIEDLGQCSSSGAKKKIPLPKEAVESLMNGHI 153
           GR LYL  LG+S   D               +LG+C+SS +K K+PLPK  VESLMNG +
Sbjct: 103 GRRLYLQGLGVSTNHD---------------ELGECASSSSKDKVPLPKGVVESLMNGEL 147

Query: 152 ELPYSNKFSLPSAVPCPGKCGETYYCSELCADADWESFHSLLCVGENT 9
            LPY  +F LPSA+ C G CGE YYCS+LCA+ADWES HSLLC GE +
Sbjct: 148 ALPYPKEFPLPSAIACSGGCGEAYYCSKLCAEADWESSHSLLCTGEKS 195


>ref|XP_002274324.1| PREDICTED: histone-lysine N-methyltransferase ATXR2-like [Vitis
           vinifera]
          Length = 495

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/124 (50%), Positives = 77/124 (62%), Gaps = 16/124 (12%)
 Frame = -2

Query: 332 GRNLYLYDLGLS-----GRMD--------CXXXXXXXXXDLFIED---LGQCSSSGAKKK 201
           GR LYL  LG+S     GR          C         + ++ED   LG+C+SS +K K
Sbjct: 103 GRRLYLQGLGVSTSNGCGRETFSHNSHDHCQVDSSEDEDNCYMEDHDELGECASSSSKDK 162

Query: 200 IPLPKEAVESLMNGHIELPYSNKFSLPSAVPCPGKCGETYYCSELCADADWESFHSLLCV 21
           +PLPK  VESLMNG + LPY  +F LPSA+ C G CGE YYCS+LCA+ADWES HSLLC 
Sbjct: 163 VPLPKGVVESLMNGELALPYPKEFPLPSAIACSGGCGEAYYCSKLCAEADWESSHSLLCT 222

Query: 20  GENT 9
           GE +
Sbjct: 223 GEKS 226


>ref|XP_003540318.1| PREDICTED: histone-lysine N-methyltransferase ATXR2-like [Glycine
           max]
          Length = 484

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/78 (64%), Positives = 59/78 (75%)
 Frame = -2

Query: 242 EDLGQCSSSGAKKKIPLPKEAVESLMNGHIELPYSNKFSLPSAVPCPGKCGETYYCSELC 63
           E   QC+S  +K K+PLP+  VESLMNG + LP+S KFSLP AVPCPG CGE YYCS  C
Sbjct: 138 ESTQQCTSGSSKTKVPLPEGIVESLMNGQLVLPFSEKFSLPPAVPCPGGCGEAYYCSMSC 197

Query: 62  ADADWESFHSLLCVGENT 9
           A+ADW S HSLLC GE++
Sbjct: 198 AEADWGSSHSLLCTGESS 215


>ref|XP_003597027.1| Histone-lysine N-methyltransferase ATXR2 [Medicago truncatula]
           gi|355486075|gb|AES67278.1| Histone-lysine
           N-methyltransferase ATXR2 [Medicago truncatula]
          Length = 659

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/116 (50%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
 Frame = -2

Query: 332 GRNLYLYDLGLSGRMDCXXXXXXXXXDLFIE--------DLGQCSSSGAKKKIPLPKEAV 177
           GR LYL +L  +   DC             E           +CSS  +K K+PLP+  V
Sbjct: 104 GRRLYLEELRANKSHDCDVGSSSKSSKNCHEMDSSDEEESTWKCSSGSSKTKVPLPEGVV 163

Query: 176 ESLMNGHIELPYSNKFSLPSAVPCPGKCGETYYCSELCADADWESFHSLLCVGENT 9
           E LMNG   LPYS KFSLP AVPC G CGE YYCS  CA+ADWES HSLLC GE++
Sbjct: 164 ELLMNGQFRLPYSEKFSLPQAVPCHGGCGEAYYCSMSCAEADWESSHSLLCTGESS 219


>ref|XP_002327842.1| SET domain protein [Populus trichocarpa]
           gi|222837251|gb|EEE75630.1| SET domain protein [Populus
           trichocarpa]
          Length = 398

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/108 (50%), Positives = 65/108 (60%)
 Frame = -2

Query: 332 GRNLYLYDLGLSGRMDCXXXXXXXXXDLFIEDLGQCSSSGAKKKIPLPKEAVESLMNGHI 153
           GR LYL  LG+     C              D G+CSSS +  K  LP+  +E+LMNG +
Sbjct: 45  GRKLYLQSLGVPSCNGC--------------DEGECSSSSSYNKACLPEGVIEALMNGEL 90

Query: 152 ELPYSNKFSLPSAVPCPGKCGETYYCSELCADADWESFHSLLCVGENT 9
            LPYS+KF LPS VPCPG C E YYCS+ CA  DWES HSLLC GE +
Sbjct: 91  VLPYSDKFPLPSTVPCPGGCQEAYYCSKSCAQTDWESSHSLLCTGERS 138


Top