BLASTX nr result

ID: Coptis23_contig00035768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035768
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive tran...    92   6e-17
ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran...    91   1e-16
emb|CBI41041.3| unnamed protein product [Vitis vinifera]               91   1e-16
gb|AEK64519.1| aintegumenta [Populus tremula x Populus alba]           86   4e-15
ref|XP_002302387.1| AP2 domain-containing transcription factor [...    85   5e-15

>ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 674

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 56/99 (56%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
 Frame = -3

Query: 289 WLGVSLSPHINMEXXXXXXXXXXXXXXXXXXXXXXXXPRSFF---HLNNSGICDGVDGEN 119
           WLG SLSPH+ ME                          SFF   HLN+S I  GV GEN
Sbjct: 15  WLGFSLSPHMKMEVASDPQYHHQTQPAAAAVSSAVPT--SFFLSPHLNSSAIYYGV-GEN 71

Query: 118 GGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVLSSSPK 2
           G F+SHLSVMPLKSDGSLCIMEALSRSQ EG+V +SSPK
Sbjct: 72  GAFHSHLSVMPLKSDGSLCIMEALSRSQQEGMVPTSSPK 110


>ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 653

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -3

Query: 163 HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVLSSSPK 2
           HLN SGI  GV+GENGGFYS LSVMPLKSDGSLCIMEALSRSQP+G+V +S+PK
Sbjct: 36  HLNYSGIYYGVEGENGGFYSPLSVMPLKSDGSLCIMEALSRSQPQGMVPTSTPK 89


>emb|CBI41041.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -3

Query: 163 HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVLSSSPK 2
           HLN SGI  GV+GENGGFYS LSVMPLKSDGSLCIMEALSRSQP+G+V +S+PK
Sbjct: 36  HLNYSGIYYGVEGENGGFYSPLSVMPLKSDGSLCIMEALSRSQPQGMVPTSTPK 89


>gb|AEK64519.1| aintegumenta [Populus tremula x Populus alba]
          Length = 161

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/102 (52%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
 Frame = -3

Query: 286 LGVSLSPHINMEXXXXXXXXXXXXXXXXXXXXXXXXPR---SFF----HLNNSGICDGVD 128
           LG SLSPH+ ME                             SF+    H NN GI  GV 
Sbjct: 1   LGFSLSPHMKMEVASDPQHHHQYHHQNHAPTAVSVSAAVPTSFYLSTTHFNNPGISYGV- 59

Query: 127 GENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVLSSSPK 2
           GEN GF+S LSVMPLKSDGSLCIMEAL+RSQPEG+VLS SPK
Sbjct: 60  GENDGFHSPLSVMPLKSDGSLCIMEALTRSQPEGMVLSPSPK 101


>ref|XP_002302387.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222844113|gb|EEE81660.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 637

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 53/103 (51%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
 Frame = -3

Query: 289 WLGVSLSPHINMEXXXXXXXXXXXXXXXXXXXXXXXXPR---SFF----HLNNSGICDGV 131
           WLG SLSPH+ ME                             SF+    H N+ GI  GV
Sbjct: 15  WLGFSLSPHMKMEVASDPQHHHQYHHQNHAPTAVSVSAAVPTSFYLSTTHYNSPGISYGV 74

Query: 130 DGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVLSSSPK 2
            GEN GF+S LSVMPLKSDGSLCIMEAL+RSQPEG+V S SPK
Sbjct: 75  -GENDGFHSPLSVMPLKSDGSLCIMEALTRSQPEGMVSSPSPK 116


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