BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035734
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71229.1| 40S ribosomal protein S17C [Hevea brasiliensis]         47   2e-13
gb|ACN41123.1| unknown [Picea sitchensis]                              47   2e-13
gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255...    47   2e-13
gb|ABK22422.1| unknown [Picea sitchensis]                              47   2e-13
ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi...    46   2e-13

>gb|ADR71229.1| 40S ribosomal protein S17C [Hevea brasiliensis]
          Length = 145

 Score = 47.0 bits (110), Expect(3) = 2e-13
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 278 LRNKIAGYTTHLMKRIQHGGRIRGISLKLGE 186
           LRNKIAG++THLMKRIQ G  +RGISLKL E
Sbjct: 46  LRNKIAGFSTHLMKRIQKGS-VRGISLKLQE 75



 Score = 38.9 bits (89), Expect(3) = 2e-13
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -1

Query: 330 HTNKKILEEVAVIPSKRLK 274
           HTNKKILEEVA+IPSKRL+
Sbjct: 29  HTNKKILEEVAIIPSKRLR 47



 Score = 34.3 bits (77), Expect(3) = 2e-13
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
 Frame = -3

Query: 190 ERRM-------ALNLEVIEVDKAGRVMLDAIGMGDLPNVV 92
           ERRM       A+  E IEVDK    ML A+GMGD+P +V
Sbjct: 79  ERRMDFVPEVSAIKTEQIEVDKETIDMLAALGMGDIPGIV 118


>gb|ACN41123.1| unknown [Picea sitchensis]
          Length = 146

 Score = 46.6 bits (109), Expect(3) = 2e-13
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 278 LRNKIAGYTTHLMKRIQHGGRIRGISLKLGE 186
           LRNKIAG++THLMKRIQ  G +RGISLKL E
Sbjct: 46  LRNKIAGFSTHLMKRIQR-GPVRGISLKLQE 75



 Score = 37.7 bits (86), Expect(3) = 2e-13
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = -1

Query: 330 HTNKKILEEVAVIPSKRLK 274
           HTNKKI+EEVA+IPSKRL+
Sbjct: 29  HTNKKIVEEVAIIPSKRLR 47



 Score = 35.4 bits (80), Expect(3) = 2e-13
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
 Frame = -3

Query: 190 ERRM-------ALNLEVIEVDKAGRVMLDAIGMGDLPNVVNK 86
           ERRM       A+  EVIEVDK    ML ++GM DLP VV +
Sbjct: 79  ERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120


>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
           [Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
           [Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
           [Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
           [Picea sitchensis]
          Length = 146

 Score = 46.6 bits (109), Expect(3) = 2e-13
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 278 LRNKIAGYTTHLMKRIQHGGRIRGISLKLGE 186
           LRNKIAG++THLMKRIQ  G +RGISLKL E
Sbjct: 46  LRNKIAGFSTHLMKRIQR-GPVRGISLKLQE 75



 Score = 37.7 bits (86), Expect(3) = 2e-13
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = -1

Query: 330 HTNKKILEEVAVIPSKRLK 274
           HTNKKI+EEVA+IPSKRL+
Sbjct: 29  HTNKKIVEEVAIIPSKRLR 47



 Score = 35.4 bits (80), Expect(3) = 2e-13
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
 Frame = -3

Query: 190 ERRM-------ALNLEVIEVDKAGRVMLDAIGMGDLPNVVNK 86
           ERRM       A+  EVIEVDK    ML ++GM DLP VV +
Sbjct: 79  ERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120


>gb|ABK22422.1| unknown [Picea sitchensis]
          Length = 145

 Score = 46.6 bits (109), Expect(3) = 2e-13
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 278 LRNKIAGYTTHLMKRIQHGGRIRGISLKLGE 186
           LRNKIAG++THLMKRIQ  G +RGISLKL E
Sbjct: 46  LRNKIAGFSTHLMKRIQR-GPVRGISLKLQE 75



 Score = 37.7 bits (86), Expect(3) = 2e-13
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = -1

Query: 330 HTNKKILEEVAVIPSKRLK 274
           HTNKKI+EEVA+IPSKRL+
Sbjct: 29  HTNKKIVEEVAIIPSKRLR 47



 Score = 35.4 bits (80), Expect(3) = 2e-13
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
 Frame = -3

Query: 190 ERRM-------ALNLEVIEVDKAGRVMLDAIGMGDLPNVVNK 86
           ERRM       A+ ++VIEVDK    ML ++GM DLP VV +
Sbjct: 79  ERRMDFVPDESAIKIDVIEVDKETMDMLASLGMADLPGVVKQ 120


>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
           gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
           ribosomal protein S17
           gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
           protein S17 [Solanum lycopersicum]
          Length = 144

 Score = 46.2 bits (108), Expect(3) = 2e-13
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 278 LRNKIAGYTTHLMKRIQHGGRIRGISLKLGE 186
           LRNKIAG++THLMKRIQ  G +RGISLKL E
Sbjct: 46  LRNKIAGFSTHLMKRIQK-GPVRGISLKLQE 75



 Score = 38.9 bits (89), Expect(3) = 2e-13
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = -1

Query: 330 HTNKKILEEVAVIPSKRLK 274
           HTNKKILEEVA+IPSKRL+
Sbjct: 29  HTNKKILEEVAIIPSKRLR 47



 Score = 34.7 bits (78), Expect(3) = 2e-13
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
 Frame = -3

Query: 190 ERRM-------ALNLEVIEVDKAGRVMLDAIGMGDLPNVVNK 86
           ERRM       A+  ++IEVDK    ML A+GM DLP VV +
Sbjct: 79  ERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQ 120