BLASTX nr result

ID: Coptis23_contig00035730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035730
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group] gi...    60   2e-07
gb|AAV25287.1| hypothetical protein [Oryza sativa Japonica Group...    59   3e-07
ref|NP_001054942.2| Os05g0219300 [Oryza sativa Japonica Group] g...    59   3e-07
gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indi...    59   3e-07
gb|EAY89356.1| hypothetical protein OsI_10860 [Oryza sativa Indi...    57   2e-06

>emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group]
           gi|38346748|emb|CAD40758.2| OSJNBa0081G05.11 [Oryza
           sativa Japonica Group] gi|116309610|emb|CAH66665.1|
           OSIGBa0110B10.2 [Oryza sativa Indica Group]
          Length = 557

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
 Frame = +1

Query: 40  VVEKIKNALEELYKEYTKDSNVMKEVSDEYELK---QGCNVEGSGVMSSPSTQKEDLTFA 210
           +VEK+ +A + L   Y K    ++  +DE+ L    +G N  GS V+     ++E   FA
Sbjct: 386 IVEKVGSAEDWLKDYYEKYEGFIRR-NDEHMLSHSHEGSNSVGSPVLGKRKLEEE---FA 441

Query: 211 LYV--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLYAMARDLL 375
           LY   +RTA    SE   Y+    V+ D ++SFDVLDWWK Q+  +P L AMA+D L
Sbjct: 442 LYKSRRRTAWQMKSEFAIYLE-EDVEED-SESFDVLDWWKRQAQKFPVLSAMAKDFL 496


>gb|AAV25287.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|57863883|gb|AAW56923.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 676

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = +1

Query: 40  VVEKIKNALEELYKEYTKDSNVMKEVSDEYELKQGCNVEGSGVMSSPSTQKEDLT--FAL 213
           +VEK+ +A E+  K+Y +        +DE+ L    + EGS  + SP   K  L   FAL
Sbjct: 505 IVEKVGSA-EDWLKDYYEKYEGFVRRNDEHMLSH--SREGSSSVGSPVLGKRKLEEEFAL 561

Query: 214 YV--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLYAMARDLL 375
           Y   +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P L +MARD L
Sbjct: 562 YKSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFL 615


>ref|NP_001054942.2| Os05g0219300 [Oryza sativa Japonica Group]
           gi|255676140|dbj|BAF16856.2| Os05g0219300 [Oryza sativa
           Japonica Group]
          Length = 772

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = +1

Query: 40  VVEKIKNALEELYKEYTKDSNVMKEVSDEYELKQGCNVEGSGVMSSPSTQKEDLT--FAL 213
           +VEK+ +A E+  K+Y +        +DE+ L    + EGS  + SP   K  L   FAL
Sbjct: 553 IVEKVGSA-EDWLKDYYEKYEGFVRRNDEHMLSH--SREGSSSVGSPVLGKRKLEEEFAL 609

Query: 214 YV--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLYAMARDLL 375
           Y   +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P L +MARD L
Sbjct: 610 YKSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFL 663


>gb|EEC74923.1| hypothetical protein OsI_10871 [Oryza sativa Indica Group]
          Length = 230

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = +1

Query: 40  VVEKIKNALEELYKEYTKDSNVMKEVSDEYELKQGCNVEGSGVMSSPSTQKEDLT--FAL 213
           +VEK+ +A E+  K+Y +        +DE+ L    + EGS  + SP   K  L   FAL
Sbjct: 46  IVEKVGSA-EDWLKDYYEKYEGFVRRNDEHMLSH--SREGSSSVGSPVLGKRKLEEEFAL 102

Query: 214 YV--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLYAMARDLL 375
           Y   +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P L +MARD L
Sbjct: 103 YKSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMARDFL 156


>gb|EAY89356.1| hypothetical protein OsI_10860 [Oryza sativa Indica Group]
          Length = 439

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
 Frame = +1

Query: 40  VVEKIKNALEELYKEYTKDSNVMKEVSDEYELKQGCNVEGSGVMSSPSTQKEDLT--FAL 213
           +VEK+ +A E+  K+Y +        +DE+ L    + EGS  + SP   K  L   FAL
Sbjct: 254 IVEKVGSA-EDWLKDYYEKYEGFVRRNDEHILSH--SREGSSSVGSPVLGKRKLEEEFAL 310

Query: 214 YV--KRTAHTSTSELKRYMSLPPVDLDVNDSFDVLDWWKAQSGNYPNLYAMARDLL 375
           Y   +RTA  + SE   Y+    V+ D ++SFDVLDWWK  +  +P L +MA D L
Sbjct: 311 YKSRRRTARQTKSEFAIYLE-EDVEED-SESFDVLDWWKRHAQKFPVLSSMASDFL 364


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