BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00035729
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   107   1e-21
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...   101   7e-20
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   100   9e-20
ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [S...    99   3e-19

>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/85 (56%), Positives = 67/85 (78%)
 Frame = -3

Query: 269 HLEKLHEFWYTLQNIDRTLWVVHQRQPSRATSFRQINIGNDCCIVLAVSERSPSSLPECR 90
           HLE+L EFW TL++ID +L V ++++ SRAT+ RQI+IGNDC I+L+++ R P SLPECR
Sbjct: 77  HLEELQEFWSTLEDIDHSLCVTNKKKLSRATTCRQIDIGNDCSIMLSINARDPRSLPECR 136

Query: 89  FLGPNSLVDSLRKTWRRNSKRWKKD 15
           F+G   +V+ +RK W RN+KRW KD
Sbjct: 137 FMGSGPVVNPVRKLWLRNNKRWMKD 161


>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = -3

Query: 269 HLEKLHEFWYTLQNIDRTLWVVHQRQPSRATSFRQINIGNDCCIVLAVSERSPSSLPECR 90
           HLEKL EFW TL++ID +L VV   + S A SFRQI+IGNDC I+L ++ + P SLPECR
Sbjct: 70  HLEKLQEFWSTLEDIDNSLCVVDIHKSSHAISFRQIDIGNDCFIMLFINTKDPRSLPECR 129

Query: 89  FLGPNSLVDSLRKTWRRNSKRWKKDVPF 6
           FLG   +  SLRK W+RN K+W +D  F
Sbjct: 130 FLGSGPVAHSLRKRWQRNCKQWMQDKTF 157


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/89 (50%), Positives = 59/89 (66%)
 Frame = -3

Query: 269 HLEKLHEFWYTLQNIDRTLWVVHQRQPSRATSFRQINIGNDCCIVLAVSERSPSSLPECR 90
           HL+ L  +W T+ +ID+ LWVV   +PS A S R+I +G+DC I+L V    PSSLPECR
Sbjct: 121 HLKNLQNYWCTMDDIDKALWVVDPTKPSYAMSHRRIALGDDCYILLHVDAHKPSSLPECR 180

Query: 89  FLGPNSLVDSLRKTWRRNSKRWKKDVPFH 3
           FLG +  ++ L K WR+N KRW  D  FH
Sbjct: 181 FLGTDGKLERLIKNWRKNRKRWTADKKFH 209


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/91 (48%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
 Frame = -3

Query: 269 HLEKLHEFWYTLQNIDRTLWVVHQRQPSRATSFRQINIGNDCCIVLAVSERSPSSLPECR 90
           HL+ L EFW  L +ID++L +V  +QPSRA++ R+I+ GNDC +++ +  + P SLPECR
Sbjct: 106 HLDYLQEFWSVLDDIDKSLCIVDAKQPSRASAIRRIHAGNDCILIVHIDFKDPKSLPECR 165

Query: 89  FLG---PNSLVDSLRKTWRRNSKRWKKDVPF 6
           F+G   P + ++SL   WRRNSK+W K+ PF
Sbjct: 166 FIGPVPPATHMNSLHMLWRRNSKKWSKERPF 196


>ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [Sorghum bicolor]
           gi|241917807|gb|EER90951.1| hypothetical protein
           SORBIDRAFT_01g009490 [Sorghum bicolor]
          Length = 361

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/89 (49%), Positives = 59/89 (66%)
 Frame = -3

Query: 269 HLEKLHEFWYTLQNIDRTLWVVHQRQPSRATSFRQINIGNDCCIVLAVSERSPSSLPECR 90
           HL+ L EFW T+  ID+ LW+V   +PS A S R+I++G+DC I+L V  R P+SLPECR
Sbjct: 169 HLKILQEFWSTMDEIDKVLWIVDPTKPSYAMSHRRISLGDDCYILLHVDARKPNSLPECR 228

Query: 89  FLGPNSLVDSLRKTWRRNSKRWKKDVPFH 3
           FLG +  +D L   WR+N K+W     FH
Sbjct: 229 FLGTDDKLDQLIINWRKNRKKWDAKKKFH 257